Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2844 ATGGCATTACCCCATTACCTTACCATGAAGCGTCCGATCCCCGGCGACGGAGACGGCGACCTCCTCAAGATGAAGAAGGTTAAGGTGGACGGCGATGCCGACGCCGACGCCGAAGAGAATTGTGTCCTCCGGGGGATGCGGTATTTCGATGACAACGTGCTGTTCGAGGTGCTGAAGCACGCGGACGCGAGGACGCTGGCTATGGCGAGCTGCGTTAACAAGCAGTGGCACAAAACTGCACAGGATGAGAGGCTTTGGGAGCTGATCTGCACCAAACAGTGGGCAAACACCGGCTGCGGCGAGGAACAGCTCCGATCCGTCGTCCTTGCCCTCGGCGGTTTCCGTCGTCTCCACTCCCTTTACCTAAGGCCTCTCTCTAAGCCATACTCTTCTTCATCGTCATCGTCATCGTCATCGTCATCTCCCACTTCCTCCTCCGTTTGGGGTCCCATCTCTCAGGCGCCGGTGGCTCCTCGGCCGAAGCCCTTGCCTCCTCGTTTGGGTAAAGACGCCGTACACCTCTCCCTCTCCCTCTTATCCATTCGCTTCTACGAGAAGATGTCTAATTTCAACAACCGAAGCAGATGA 588 0.5714 MALPHYLTMKRPIPGDGDGDLLKMKKVKVDGDADADAEENCVLRGMRYFDDNVLFEVLKHADARTLAMASCVNKQWHKTAQDERLWELICTKQWANTGCGEEQLRSVVLALGGFRRLHSLYLRPLSKPYSSSSSSSSSSSSPTSSSVWGPISQAPVAPRPKPLPPRLGKDAVHLSLSLLSIRFYEKMSNFNNRSR* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2844 195 PANTHER F-BOX ONLY PROTEIN 48-RELATED 8 194 IPR045118 GO:0019005|GO:0031146
Amo17g2844 195 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN-RELATED 8 194 - -
Amo17g2844 195 MobiDBLite consensus disorder prediction 127 151 - -
Amo17g2844 195 Gene3D - 42 138 - -
Amo17g2844 195 MobiDBLite consensus disorder prediction 127 165 - -
Amo17g2844 195 SUPERFAMILY F-box domain 48 95 IPR036047 GO:0005515
Amo17g2844 195 Pfam F-box-like 52 92 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2844 Amo-Chr17 130487605 130488571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2844 K14495 - gmx:100801734 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2844 17 130487605 130488571 Amo17g2844 17 130487605 130488571 ECH
Amo08g0819 08 14421695 14422773 Amo17g2844 17 130487605 130488571 hybridization