Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0819 ATGAAGCGTCCGATCTCCCGCGACGGCGACGGCAACGGCGACCTCCTCAAGATGAAGAAGGTTAAGGTGGACGGCGATGCCAACGCCGAAGAGAATTGTGTCCTCCGGGGGATGCGGTATTTCGATGACAACGTGCTGTTCGAGGTGCTGAAGCACGTGGACGCGAGGACGCTGGCTATGGCCAGCTGCGTTAACAAGCAGTGGCACAAAACTGCACAGGATGAGAGGCTTTGGGAGCTGATCTGCACCAAACAGTGGGCAAACACCGGCTGCGGCGAGGAACAGCTCCGATCCGTCGTCCTTGCCCTCGGCGGTTTCCGTCGTCTCCACTCCCTTTACCTAAGGCCTCTCTCTAAGCCATACTCGTCTTCATCGTCATCGTCATCATCATCTCCCACTTCCTCCTCCGTTTGGGGTCCCATCTCTCAGGCGGCGGTGGCTCCTCGGCCGAAGCCCCTGCCTCCTCGTTTGGGTAAAGACGCCGTACACCTCTCCCTCTCCCTCTTATCCATTCGCTTCTACGAGAAGATGTCTAATTTCAACAACCGAACCAGATGA 558 0.5735 MKRPISRDGDGNGDLLKMKKVKVDGDANAEENCVLRGMRYFDDNVLFEVLKHVDARTLAMASCVNKQWHKTAQDERLWELICTKQWANTGCGEEQLRSVVLALGGFRRLHSLYLRPLSKPYSSSSSSSSSSPTSSSVWGPISQAAVAPRPKPLPPRLGKDAVHLSLSLLSIRFYEKMSNFNNRTR* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0819 185 MobiDBLite consensus disorder prediction 118 137 - -
Amo08g0819 185 PANTHER F-BOX PROTEIN GID2-LIKE 12 179 - -
Amo08g0819 185 PANTHER F-BOX ONLY PROTEIN 48-RELATED 12 179 IPR045118 GO:0019005|GO:0031146
Amo08g0819 185 Gene3D - 31 130 - -
Amo08g0819 185 SUPERFAMILY F-box domain 40 87 IPR036047 GO:0005515
Amo08g0819 185 Pfam F-box-like 44 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0819 Amo-Chr8 14421695 14422773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0819 K14495 - gmx:100527591 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0819 08 14421695 14422773 Amo17g2844 17 130487605 130488571 hybridization