Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2791 ATGGCCCTCTCACCACTACTCTTCACCATAATCTCCTTCTTGCTCCTTTTCCAACTCCAGGCAACACCACCACCATTTGCTTGTGACTTTTCAGACCCTTCCACAAGATCCTACCCATTCTGCAATCCAAAGCTTCCAATCGCTCAGCGAGTCAGAGACCTCGTCTCAAGACTCACATTGGACGAGAAACTCTCCCAACTCGTCAACAAGGCCCCTCCCATTCCTCGCCTCGGTATCCCCCGCTACCAGTGGTGGAGCGAGGCACTCCACGGCGTTGCCGGCATTGGCGGCGGCATCTTCTTCAACGGCACTATCACTTCCGCCACCAGCTTCCCCCAAGTCATTCTCACCGCTGCCACTTTTGACTCCCACCTCTGGTACCGAATCGGTCACGCGATCGGGATAGAAGCAAGAGCAATATACAATGCAGGGCAAGCAATAGGGATGACATTTTGGGCACCAAACATAAACATTTTTAGGGACCCGAGATGGGGCAGAGGACAAGAGACAGCTGGTGAAGACCCACTCATGACTTCTAACTATGCTGTCTCCTACGTTAGAGGCCTTCAAGGTGACTCCTTTCAGGGTGGAACACTCAGAGGCCACTTACAAGCTTCTGCTTGTTGCAAGCATTTCACTGCTTATGATTTGGACAACTGGAAGGGCGTTAATCGCTTTGTCTTTGATGCTCGTGTAAGTTTGCAAGATCTAGCGGACACATACCAGCCTCCATTTAAGAGTTGCATAGAAGAAGGACATGCAAGTGGGATAATGTGTGCGTACAACCGTGTCAATGGGGTTCCAAATTGTGCTGATTACAACCTCTTAACCAACATTGCAAGAAAACAATGGGATTTCGATGGGTATATTACATCTGATTGTGGAGCAGTGAGCCTCTTACATGATGAACAAGGATATGCAAAATCACCAGAGGATGCTGTTTCCGATGTCCTTCGGGCAGGGATGGATGTGGAATGTGGAAGCTATTTGACAGAGCATGCTAAATCAGCAGTATTGAAGAAAAAGTTAGCTACATCTGAAATAGACCGCGCCCTTCACAATCTGTTCTCAATCAGAATGAGGTTAGGACTATTTGATGGAGATCCAAGCAAGCTCCCATTTGGGTTCATTGGACCCAACAACGTGTGTTCCAAGGAACACCGCTACTTAGCTCTCGAGGCAGCAAGAAACGGCATTGTCCTCTTGAAGAACCAACACTCCCTCCTCCCACTTCCTAAAACAAATCCTCCTATCTCCCTCGCCGTCATCGGCCCCAACGCCAATGCTTCCCCTCTAACACTTCTTGGAAACTATGCTGGCCCTCCCTGCAACCAACTCACATTGTTGCAGGGCTTCCAGCATTATGTTAAGGACACTCTCTACCACCCCGGATGCGACGGCGGCGCCAAGTGCCCTTTTGCCCACATTGACCAGGCTGTTCAACTTGCCAGCAAAGTGGATTATGTTGTCATGGTTATGGGGTTGGATCAGAGCCAGGAGAAGGAGGAGCGCGATCGCGTTCACCTTGACTTGCCCGGCAAGCAACTTGAACTCATCAATGCCGTCGCTAAAGCTTCTAAGAGGCCCGTTATTTTGGTGCTTCTCTGCGGAGGCCCGGTGGATATCTCTTCCGCCAAGTATAATAACAAAATTGGAGGAATTCTATGGGCTGGTTATCCCGGGGAACTTGGCGCCATTGCACTTGCTCAGATCATCTTTGGAGGAAGATTACCAATAACTTGGTACCCAAAAGATTACATAAAAGTACCAATGACAGACATGAGGATGCGTGCTGATCCTTCATCAGGCTACCCTGGTAGAACATATAGATTCTACACAGGTCCTAAGGTCTATGAATTCGGCTTTGGCCTAAGCTACACCAAATACTCCTATGAATTTGTTTCCGTCACGCGCGACAAGCTCCACTTCAGCCATTCATCCACTCATTTCATGCTACAAAACTCGTCAGAAACCTTGAGGTACAAGTTAGTCTCAGAGTTGAGCGAAGAAGCTTGCAAAAGCATGGCGGTTTCGGTGACTGTGGGAGTTCAGAACCATGGAAGCATGGTTGGGAAACATCCTGTGTTGCTGTTCTTGAAACATGGGAGACAGGGGAATGGGAATCCTATGAAACAGTTGGTTGGTTTTGAGAGTGTGTTGTTGGATGCAGGGGAAAAGGTTCATGTTGGATTTGAACTAAGTCCTTGTGAGCATATGAGTAGTGCAAATGAGGAAGGTTCATTGGTAATTGAAGAAGGATCTCATTTGTTGCTTGTAGGTGATGTTGAGTACCCAATTCATGTCATTGTTTGA 2313 0.4812 MALSPLLFTIISFLLLFQLQATPPPFACDFSDPSTRSYPFCNPKLPIAQRVRDLVSRLTLDEKLSQLVNKAPPIPRLGIPRYQWWSEALHGVAGIGGGIFFNGTITSATSFPQVILTAATFDSHLWYRIGHAIGIEARAIYNAGQAIGMTFWAPNINIFRDPRWGRGQETAGEDPLMTSNYAVSYVRGLQGDSFQGGTLRGHLQASACCKHFTAYDLDNWKGVNRFVFDARVSLQDLADTYQPPFKSCIEEGHASGIMCAYNRVNGVPNCADYNLLTNIARKQWDFDGYITSDCGAVSLLHDEQGYAKSPEDAVSDVLRAGMDVECGSYLTEHAKSAVLKKKLATSEIDRALHNLFSIRMRLGLFDGDPSKLPFGFIGPNNVCSKEHRYLALEAARNGIVLLKNQHSLLPLPKTNPPISLAVIGPNANASPLTLLGNYAGPPCNQLTLLQGFQHYVKDTLYHPGCDGGAKCPFAHIDQAVQLASKVDYVVMVMGLDQSQEKEERDRVHLDLPGKQLELINAVAKASKRPVILVLLCGGPVDISSAKYNNKIGGILWAGYPGELGAIALAQIIFGGRLPITWYPKDYIKVPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGFGLSYTKYSYEFVSVTRDKLHFSHSSTHFMLQNSSETLRYKLVSELSEEACKSMAVSVTVGVQNHGSMVGKHPVLLFLKHGRQGNGNPMKQLVGFESVLLDAGEKVHVGFELSPCEHMSSANEEGSLVIEEGSHLLLVGDVEYPIHVIV* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2791 770 SMART Fn3_like_2 693 763 IPR026891 -
Amo17g2791 770 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 9 769 - -
Amo17g2791 770 Gene3D Immunoglobulins 653 768 IPR013783 -
Amo17g2791 770 PANTHER SUGAR HYDROLASE-RELATED 9 769 IPR044993 GO:0009044|GO:0045493
Amo17g2791 770 Gene3D - 50 372 IPR036962 GO:0004553|GO:0005975
Amo17g2791 770 Pfam Fibronectin type III-like domain 695 761 IPR026891 -
Amo17g2791 770 Gene3D - 384 627 IPR036881 GO:0004553|GO:0005975
Amo17g2791 770 Pfam Glycosyl hydrolase family 3 C-terminal domain 399 626 IPR002772 GO:0004553|GO:0005975
Amo17g2791 770 PRINTS Glycosyl hydrolase family 3 signature 205 221 IPR001764 GO:0004553|GO:0005975
Amo17g2791 770 PRINTS Glycosyl hydrolase family 3 signature 111 130 IPR001764 GO:0004553|GO:0005975
Amo17g2791 770 PRINTS Glycosyl hydrolase family 3 signature 279 297 IPR001764 GO:0004553|GO:0005975
Amo17g2791 770 SUPERFAMILY (Trans)glycosidases 38 397 IPR017853 -
Amo17g2791 770 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 399 629 IPR036881 GO:0004553|GO:0005975
Amo17g2791 770 Pfam Glycosyl hydrolase family 3 N terminal domain 104 355 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2791 Amo-Chr17 129348569 129356909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2791 14 770 Glycoside Hydrolase AT1G78060 64.052 0.0 1006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2791 - - aprc:113867121 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2791 17 129348569 129356909 Amo17g2791 17 129348569 129356909 ECH
Amo08g0775 08 13731796 13741856 Amo17g2791 17 129348569 129356909 hybridization