Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0775 ATGGCCCTCTCACCACTACTCTTCACCATAATCTCCTTCTTGCTCCTTTTCCAACTCCAGGCAACACCACCACCATTTGCTTGTGACTTTTCAGACCCTTCCACAAGATCCTACCCATTCTGCAATCCAAAGCTTCCAATCGCTCAGCGAGTCAGAGACCTCGTCTCAAGACTCACATTGGACGAGAAACTCTCCCAACTCGTCAACAAGGCCCCTCCCATTCCTCGCCTCGGTATCCCCCGCTACCAGTGGTGGAGCGAGGCACTCCACGGCGTTGCCGGCATTGGCGGCGGCATCTTCTTCAACGGCACTATCACTTCCGCCACCAGCTTCCCCCAAGTCATTCTCACCGCTGCCACTTTTGACTCCCACCTCTGGTACCGAATCGGTCACGCGATCGGGATAGAAGCAAGAGCAATATACAATGCAGGGCAAGCAATAGGGATGACATTTTGGGCACCAAACATAAACATTTTTAGGGACCCGAGATGGGGCAGAGGACAAGAGACAGCTGGTGAAGACCCACTCATGACTTCTAACTATGCTGTCTCCTACGTTAGAGGCCTTCAAGGTGACTCCTTTCAGGGTGGAACACTCAGAGGCCACTTACAAGCTTCTGCTTGTTGCAAGCATTTCACTGCTTATGATTTGGACAACTGGAAGGGCGTTAATCGCTTTGTCTTTGATGCTCGTGTAAGTTTGCAAGATCTAGCGGACACATACCAGCCTCCATTTAAGAGTTGCATAGAAGAAGGACATGCAAGTGGGATAATGTGTGCGTACAACCGTGTCAATGGGGTTCCAAATTGTGCTGATTACAACCTCTTAACCAACATTGCAAGAAAACAATGGGATTTCGATGGGTATATTACATCTGATTGTGGAGCAGTGAGCCTCTTACATGATGAACAAGGATATGCAAAATCACCAGAGGATGCTGTTTCCGATGTCCTTCGGGCAGGTATGGATGTGGAATGCGGAAGCTATTTGACAGAGCATGCTAAATCAGCAGTATTGAAGAAAAAGTTAGCTACATCTGAAATAGACCGCGCCCTTCACAATCTGTTCTCAATCAGAATGAGGTTAGGACTATTTGATGGAGATCCAACCAAGCTCCCATTTGGGTTCATTGGACCCAACAACGTGTGTTCCAAGGAACACCGCTACTTAGCCCTGGAGGCAGCAAGAAACGGCATTGTCCTCTTGAAGAACCAACACTCCCTCCTCCCACTTCCTAAGACAAACCCTCCTATCTCCCTCGCCGTCATCGGCCCCAACGCCAATGCTTCCCCTCTAACCCTTCTTGGAAACTATGCTGGCCCTCCCTGCAACCAACTCACTTTGTTGCAGGGCTTCCAGCATTATGTTAAGGACACTCTCTACCACCCCGGATGCGACGGCGGCGCCAAGTGCCCTTTTGCCCACATAGACCAGGCTGTTCAACTTGCCAGCAAAGTGGATTATGTTGTCATGGTTATGGGGTTGGATCAGAGTCAGGAGAAGGAGGAGCGCGATCGCGTTCACCTTGACTTGCCCGGCAAGCAACTTGAACTCATCAATGCCGTCGCTAAAGCTTCTAAGAAGCCCGTTATTTTGGTGCTTCTCTGCGGAGGCCCGGTGGATATCTCTTCCGCCAAGTATAATAACAAAGTTGGAGGAATTCTATGGGCTGGTTATCCCGGGGAACTTGGCGCCATTGCACTTGCTCAGATCATCTTTGGTGACCATAACCCAGGAGGAAGATTACCAATAACTTGGTACCCAAAAGATTACATAAAAGTACCAATGACAGACATGAGGATGCGTGCTGATCCTTCATCAGGCTACCCTGGTAGAACATATAGATTCTACACAGGTCCTAAGGTCTATGAATTCGGCTTTGGCCTAAGCTACACCAAATACTCCTATGAATTTGTTTCCGTCACGCGCGACAAGCTCCACTTCAGCCCTTCATCCACTCATTTCATGCTACAAAACTCGTCAGAAACCTTGAGGTACAAGTTAGTCTCAGAGTTGAGCGAAGAAGCTTGCAAAAGCATGGCGGTTTCGGTGACTGTGGGAGTTCAGAACCATGGAAGCATGGTTGGGAAACATCCTGTGTTGCTGTTCTTGAAACATGGGAGACAGGGGAATGGGAATCCTATGAAACAGTTGGTTGGTTTTGAGAGTGTGTTGTTGGATGCAGGGGAAAAGGTTCATGTTGGATTTGAACTAAGTCCTTGTGAGCATATGAGTAGTGCAAATGAGGAAGGTTCATTGGTAATTGAAGAAGGATCTCATTTGTTGCTTGTAGGTGATGTTGAGTACCCAATTCATGTCATTGTTTGA 2328 0.4832 MALSPLLFTIISFLLLFQLQATPPPFACDFSDPSTRSYPFCNPKLPIAQRVRDLVSRLTLDEKLSQLVNKAPPIPRLGIPRYQWWSEALHGVAGIGGGIFFNGTITSATSFPQVILTAATFDSHLWYRIGHAIGIEARAIYNAGQAIGMTFWAPNINIFRDPRWGRGQETAGEDPLMTSNYAVSYVRGLQGDSFQGGTLRGHLQASACCKHFTAYDLDNWKGVNRFVFDARVSLQDLADTYQPPFKSCIEEGHASGIMCAYNRVNGVPNCADYNLLTNIARKQWDFDGYITSDCGAVSLLHDEQGYAKSPEDAVSDVLRAGMDVECGSYLTEHAKSAVLKKKLATSEIDRALHNLFSIRMRLGLFDGDPTKLPFGFIGPNNVCSKEHRYLALEAARNGIVLLKNQHSLLPLPKTNPPISLAVIGPNANASPLTLLGNYAGPPCNQLTLLQGFQHYVKDTLYHPGCDGGAKCPFAHIDQAVQLASKVDYVVMVMGLDQSQEKEERDRVHLDLPGKQLELINAVAKASKKPVILVLLCGGPVDISSAKYNNKVGGILWAGYPGELGAIALAQIIFGDHNPGGRLPITWYPKDYIKVPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGFGLSYTKYSYEFVSVTRDKLHFSPSSTHFMLQNSSETLRYKLVSELSEEACKSMAVSVTVGVQNHGSMVGKHPVLLFLKHGRQGNGNPMKQLVGFESVLLDAGEKVHVGFELSPCEHMSSANEEGSLVIEEGSHLLLVGDVEYPIHVIV* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0775 775 Pfam Glycosyl hydrolase family 3 N terminal domain 104 355 IPR001764 GO:0004553|GO:0005975
Amo08g0775 775 PANTHER SUGAR HYDROLASE-RELATED 9 774 IPR044993 GO:0009044|GO:0045493
Amo08g0775 775 SMART Fn3_like_2 698 768 IPR026891 -
Amo08g0775 775 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 9 774 - -
Amo08g0775 775 SUPERFAMILY (Trans)glycosidases 38 397 IPR017853 -
Amo08g0775 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 399 634 IPR036881 GO:0004553|GO:0005975
Amo08g0775 775 PRINTS Glycosyl hydrolase family 3 signature 111 130 IPR001764 GO:0004553|GO:0005975
Amo08g0775 775 PRINTS Glycosyl hydrolase family 3 signature 205 221 IPR001764 GO:0004553|GO:0005975
Amo08g0775 775 PRINTS Glycosyl hydrolase family 3 signature 279 297 IPR001764 GO:0004553|GO:0005975
Amo08g0775 775 Pfam Fibronectin type III-like domain 700 766 IPR026891 -
Amo08g0775 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 399 631 IPR002772 GO:0004553|GO:0005975
Amo08g0775 775 Gene3D Immunoglobulins 660 773 IPR013783 -
Amo08g0775 775 Gene3D - 50 372 IPR036962 GO:0004553|GO:0005975
Amo08g0775 775 Gene3D - 384 632 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0775 Amo-Chr8 13731796 13741856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0775 14 775 Glycoside Hydrolase AT1G78060 64.837 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0775 - - aprc:113867121 1299.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0775 08 13731796 13741856 Amo17g2791 17 129348569 129356909 hybridization