Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2773 ATGGCTTCCGAGAAGGTTGAGACAGTTGTTGCTGGGAATTACTTAGAAATGGAGAGAGAAGAGGAAGATTCAAAATCTGCTGCTAGCAAACTTTCTAGCCTCTTCTGGCATGGTGGTTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTATTAACACTGCCATATTCATTTTCACAACTTGGGATGGTGTCTGGGATTATATTTCAGCTTTTTTATGGACTCATGGGAAGTTGGACCGCATACCTCATAAGTGTTCTTTATGTTGAGTATAGAACAAGAAAGGAGAGGGAAAAGGTTGATTTTAGAAACCATGTAATTCAGTGGTTTGAAGTTCTTGATGGACTTTTAGGCAAACACTGGAGGAATCTTGGTCTCTTTTTCAACTGTACTTTCCTTCTCTTTGGATCTGTTATTCAACTAATTGCTTGTGCAAGTAACATATATTACATAAACGACAATCTGGACAAGAGAACCTGGACATACATATTTGGAGCATGCTGTGCAACAACAGTGTTCATACCATCTTTCCACAATTATAGGATATGGTCATTCTTGGGTTTGTTAATGACTACTTACACAGCATGGTACATGACCATAGCTTCCCTTATGCACGGCCAGGTTGAAGGGGTGAAGCACTCAGGGCCAACCAAGTTGGTTCTCTATTTCACCGGTGCTACAAACATTCTCTACACTTTTGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTTAAGATGATATATCTGATAGCAACATTGTATGTGTTGACACTAACATTGCCATCAGCTTCAGCAGTGTATTGGGCATTTGGAGATCTGCTTCTAACACATGCCAATGCACTCTCATTGCTCCCAAGAACAGGGTTCAGGGACACAGCCGTAATTTTGATGCTGATTCACCAGTTCATAACATTTGGGTTTGCATGCACCCCACTATACTTTGTGTGGGAGAAATTCATTGGTGTTCATGAGACAAGAGCTTGTTCAAGAGAGCATTGCCAGGCTTCCTGTGGTCTACCAATTTGGTTCCTTGCAATCATATTCCCCTTCTTTGGTCCCATCAATTCAACCGTTGGATCTCTCTTGGTCAGCTTCACTGTTTACATCATCCCTGCCTTGGCTCACATGATCACTTTCGCTCCCGCCCCTGCTAGAGAGAATGCTGTGGAGAGACCACCATCAATGTTAGGAGGTTGGGTAGGATTGTACTCCATGAATGTGTTTGTGGTGGTATGGGTTTTGGTGGTAGGGTTTGGGTTGGGAGGATGGGCAAGTATGCTTAATTTCATTCACCAAATCAACACTTTCGGACTATTTGCAAAGTGCTATCAATGTCCCCCTCACAACAAGCCTTCAATTAAATTAAATTAA 1413 0.4225 MASEKVETVVAGNYLEMEREEEDSKSAASKLSSLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIIFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYMTIASLMHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVLTLTLPSASAVYWAFGDLLLTHANALSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETRACSREHCQASCGLPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAPARENAVERPPSMLGGWVGLYSMNVFVVVWVLVVGFGLGGWASMLNFIHQINTFGLFAKCYQCPPHNKPSIKLN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2773 470 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 3 459 - -
Amo17g2773 470 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
Amo17g2773 470 PANTHER OS05G0424000 PROTEIN-RELATED 3 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2773 Amo-Chr17 128989668 128993762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2773 1 465 Organic Solute Cotransporters AT1G77690 85.350 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2773 K13946 - gmx:100815243 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2773 17 128989668 128993762 Amo17g2773 17 128989668 128993762 ECH
Amo08g0712 08 12581613 12585110 Amo17g2773 17 128989668 128993762 hybridization