Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0712 ATGGCTTCCGAGAAGGTTGAGACAGTTGTTGCTGGGAATTACTTAGAAATGGAGAGAGAAGAGGAAGATTCAAAATCTGCTGCTAGCAAACTTTCTAGCCTCATCTGGCATGGTGGTTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTATTAACACTTCCATATTCATTTTCACAACTTGGTATGGTGTCTGGGATTATATTTCAGCTTTTTTATGGACTCATGGGAAGTTGGACCGCATACCTCATAAGTGTTCTTTATGTTGAGTATAGAACAAGAAAGGAGAGGGAAAAGGTTGATTTTAGAAACCATGTAATTCAGTGGTTTGAAGTTCTTGATGGACTTTTAGGCAAACACTGGAGGAATCTTGGTCTCTTTTTCAACTGTACTTTCCTTCTCTTTGGATCTGTTATTCAACTAATTGCTTGTGCAAGTAACATATATTACATAAACGACAATCTGGACAAGAGAACCTGGACATACATATTTGGAGCATGCTGTGCAACAACAGTGTTCATACCATCTTTCCACAATTATAGGATATGGTCATTCTTGGGTTTGTTAATGACTACTTACACAGCATGGTACATGACCATAGCTTCCCTTATGCACGGCCAGGTTGAAGGGGTGAAGCACTCAGGGCCAACCAAGTTGGTTCTCTATTTCACCGGTGCTACAAACATTCTCTACACTTTTGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTTAAGATGATATATCTGATAGCAACATTGTATGTGTTGACACTAACATTGCCATCAGCTTCAGCAGTGTATTGGGCATTTGGAGATCTGCTTCTAACACATGCCAATGCACTCTCATTGCTCCCAAGAACAGGGTTCAGGGACACAGCCGTAATTTTGATGCTGATTCACCAGTTCATAACATTTGGGTTTGCATGCACCCCACTATACTTTGTGTGGGAGAAATTCATTGGTGTTCATGAGACWAAGAGCTTGTTCAAGAGAGCATTGRCCAGGCTTCCTGTGGTCRTACCAATTTGGTTCCTTGCAATCATATTCCCCTTCTTTGGTCCCATCAATTCAACCGTTGGATCTCTCTTGGTCAGCTTCACTGTTTACATCATCCCTGCCTTGGCTCACATGATCACTTTCGCTCCTGCCCCTGCTAGAGAGAATGCTGTGGAGAGACCACCATCAATGTTAGGAGGTTGGGTAGGATTGTACTCCATGAATGTGTTTGTGGTGGTATGGGTTTTGGTGGTAGGGTTTGGGTTGGGAGGATGGGCAAGTATGCTTAATTTCATTCACCAAATCAACACTTTCGGACTCTTTGCAAAGTGCTATCAATGTCCCCCTCACAACAAGCCTTCAATTAAATTAAATTAA 1416 0.4202 MASEKVETVVAGNYLEMEREEEDSKSAASKLSSLIWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIIFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYMTIASLMHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVLTLTLPSASAVYWAFGDLLLTHANALSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALXRLPVVXPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAPARENAVERPPSMLGGWVGLYSMNVFVVVWVLVVGFGLGGWASMLNFIHQINTFGLFAKCYQCPPHNKPSIKLN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0712 471 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 3 460 - -
Amo08g0712 471 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
Amo08g0712 471 PANTHER OS05G0424000 PROTEIN-RELATED 3 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0712 Amo-Chr8 12581613 12585110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0712 1 466 Organic Solute Cotransporters AT1G77690 87.261 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0712 K13946 - gmx:100815243 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0712 08 12581613 12585110 Amo17g2773 17 128989668 128993762 hybridization