Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2760 ATGCAGGTTCATTGTACCTGCACTCACCCACCCATGAGATTTGCGCCTTCTTCTTCTTTTCCCAAATTCATTGGCTTTTCAAAGCATTTCCACACTCTTATTGCTCCTTCTTCCCCAAAGTTATCGCCTTTCGTTCTTGCTGCCACCATGTCCACCGACACTCTTCCCACTCAGAATCACACCACCGCCACCACCACCCAACGTTGCAAAGCGCTTAGAGAAGTTCAAAACAACAATCTTCACCCAAATGCCATAAATCTTGGTCAAGGATTTCCCAACTTTGATGGTCCAGATTTTGTGAAGGAAGCAGCGATTCAGGCAATCAGGGATGGCAAAAATCAGTATGCCCGTGGCTATGGAATTCCGGACCTGAACCTTGCCATTGCTGAGAGATTTAAGAAAGATAGCGGACTTGTGGTGGACCCTGAAAAGGAAGTTACAGTTACATGTGGGTGCACTGAAGCAATTGCTGCAACTATATTAGGATTGATAAACCCTGGCGATGAGGTTATTGTGTTTGCTCCCTTTTATGATTCTTATGAAGCTACTTTATCCATGGCTGGTGCAAATATAAAATGCATCACTTTGCGCCCTCCGGAATTTGCTGTCCCAATCGAAGAATTGAAGTCAGCCATGTCGAAGAATACTCGTGCCATTATGATAAATACTCCTCACAATCCTACCGGAAAGATGTTCACCCGAGAGGAACTCGATTCCATTGCATCTCTTTGCATTGAGAATGATGTTCTTGTTTTTAGTGATGAAGTCTATGATAAGTTGGCATTCGATATGGAGCATATTTCACCCGCTTCATTACCTGGCATGTTTGAGAGGACAGTGACTATGAACTCCTTGGGAAAGACATTCTCCTTAACAGGATGGAAGATCGGGTGGGCCATAGCACCCCCGCACTTAACATGGGGAGTGCGACAGGCACACTCTTTCCTCACTTTCGCAAACTCCACTCCTATGCAGTGGGCAACAGCAGAAGCTCTTAGAGCACCAGAGTCTTACTATGTGGAGCTAAAGAGAGATTACATGGAAAAGAGAGCTATTTTGGTGGAAGGATTGGAATCTGTTGGCTTTAAGGTATTTCCATCAAGAGGAACCTATTTTGTGGTTGTAGATCACACGCCTTTCGGACTGGAAAACGATGTAGCATTTTGTGAGTATCTAATTAAGGAGGTTGGGGTGGTGGCGATTCCTGTCAGCGCATTTTGCTTGGATCCAGAAGACGGAAAGAATCTTGTCAGGTTTACTTTCTGCAAGGATGAGGGAACACTGAAGGCTGCAGTTAAGAGGATGAAGGAGAAGCTTAGAAAATGA 1326 0.448 MQVHCTCTHPPMRFAPSSSFPKFIGFSKHFHTLIAPSSPKLSPFVLAATMSTDTLPTQNHTTATTTQRCKALREVQNNNLHPNAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGYGIPDLNLAIAERFKKDSGLVVDPEKEVTVTCGCTEAIAATILGLINPGDEVIVFAPFYDSYEATLSMAGANIKCITLRPPEFAVPIEELKSAMSKNTRAIMINTPHNPTGKMFTREELDSIASLCIENDVLVFSDEVYDKLAFDMEHISPASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFANSTPMQWATAEALRAPESYYVELKRDYMEKRAILVEGLESVGFKVFPSRGTYFVVVDHTPFGLENDVAFCEYLIKEVGVVAIPVSAFCLDPEDGKNLVRFTFCKDEGTLKAAVKRMKEKLRK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2760 441 Gene3D - 97 335 IPR015421 GO:0003824
Amo17g2760 441 PANTHER FI04487P 70 441 - -
Amo17g2760 441 Pfam Aminotransferase class I and II 83 434 IPR004839 GO:0009058|GO:0030170
Amo17g2760 441 SUPERFAMILY PLP-dependent transferases 73 440 IPR015424 -
Amo17g2760 441 PANTHER FI04487P 70 441 - -
Amo17g2760 441 Gene3D Aspartate Aminotransferase, domain 1 81 435 IPR015422 GO:0003824
Amo17g2760 441 CDD AAT_like 85 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2760 Amo-Chr17 128713069 128715269 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2760 K23977 - gmx:100814682 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2760 17 128713069 128715269 Amo17g2760 17 128713069 128715269 ECH
Amo08g0701 08 12470038 12472703 Amo17g2760 17 128713069 128715269 hybridization