Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0701 ATGCAGGTTCATTGTACCTGCACTCACCCACCCATGAGATTTGCGCCTTCTTCTTCTTTTTCCAAATTCATTGGCTTTTCAAAGCATTTCCACACTCTTATTGCTCCTTCTTCCCCAAAGTTATCGCCTTTCGTTCTTGCTGCCACCATGTCCACCGACACTCTTCCCACTCAGAATCACACCACCGCCACCACCACCCAACGTCCTTTGCAGGTTGCAAAGCGCTTAGAGAAGTTCAAAACAACAATCTTCACCCAAATGAGTAGTCTTGCAATCAAACATGGAGCCATAAATCTTGGTCAAGGATTTCCCAACTTTGATGGTCCAGATTTTGTGAAGGAAGCAGCGATTCAGGCAATCAGGGATGGAAAAAATCAGTATGCCCGTGGCCATGGAATTCCGGACCTGAACCTTGCCATTGCTGAGAGATTTAAGAAAGATAGTGGACTTGTGGTGGACCCTGAAAAGGAAGTTACAGTTACATGTGGGTGCACTGAAGCAATTGCTGCAACTATATTAGGATTAATAAACCCTGGCGATGAGGTTATTGTGTTTGCTCCTTTTTATGATTCTTATGAAGCTACTTTATCCATGGCTGGTGCAAATATAAAATGCATCACTTTGCGCCCTCCGGAATTTGCTGTCCCAATCGAAGAATTGAAGTCAGCTGTGTCGAAGAATACTCGTGCCATTATGATAAATACTCCTCACAATCCTACCGGAAAGATGTTCACCCGAGAGGAACTCGATTCCATTGCATCTCTTTGCATTGAGAATGATGTTCTTGTTTTTAGTGATGAAGTCTATGATAAGTTGGCATTCGATATGGAGCATATTTCACCCACTTCGTTACCTGGCATGTTTGAGAGGACAGTGACAATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATCGGGTGGGCCATAGCACCCCCGCACTTAACATGGGGAGTGCGACAGGCACACTCTTTCCTCACTTTCGCAAACTCCACTCCTATGCAGTGGGCAACAGCAGAAGCTCTTAGAGCACCAGAGTCTTACTATGTGGAGCTAAAGAGAGATTACATGGAAAAGAGAGCTATTTTGGTGGAAGGATTGGAATCTGTTGGCTTCAAGGTATTTCCATCAAGAGGAACCTATTTTGTGGTTGTAGATCACACGCCTTTCGGACTGGAAAACGATGTAGCATTTTGTGAGTATCTAATTAAGGAGGTTGGGGTGGTGGCGATTCCTGTCAGCGCGTTTTGCTTGGATCCAGAAGACGGAAAGAATCTTGTCAGGTTTACTTTCTGCAAGGATGAGGGAACACTGAAGGCTGCAGTTAAGAGGATGAAGGAGAAGCTTAGAAAATGA 1362 0.4471 MQVHCTCTHPPMRFAPSSSFSKFIGFSKHFHTLIAPSSPKLSPFVLAATMSTDTLPTQNHTTATTTQRPLQVAKRLEKFKTTIFTQMSSLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGHGIPDLNLAIAERFKKDSGLVVDPEKEVTVTCGCTEAIAATILGLINPGDEVIVFAPFYDSYEATLSMAGANIKCITLRPPEFAVPIEELKSAVSKNTRAIMINTPHNPTGKMFTREELDSIASLCIENDVLVFSDEVYDKLAFDMEHISPTSLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFANSTPMQWATAEALRAPESYYVELKRDYMEKRAILVEGLESVGFKVFPSRGTYFVVVDHTPFGLENDVAFCEYLIKEVGVVAIPVSAFCLDPEDGKNLVRFTFCKDEGTLKAAVKRMKEKLRK* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0701 453 SUPERFAMILY PLP-dependent transferases 72 452 IPR015424 -
Amo08g0701 453 PANTHER FI04487P 72 453 - -
Amo08g0701 453 Gene3D - 109 347 IPR015421 GO:0003824
Amo08g0701 453 PANTHER FI04487P 72 453 - -
Amo08g0701 453 Pfam Aminotransferase class I and II 97 446 IPR004839 GO:0009058|GO:0030170
Amo08g0701 453 CDD AAT_like 97 449 - -
Amo08g0701 453 Gene3D Aspartate Aminotransferase, domain 1 86 447 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0701 Amo-Chr8 12470038 12472703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0701 K23977 - gmx:100814682 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0701 08 12470038 12472703 Amo17g2760 17 128713069 128715269 hybridization