Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2717 ATGGTGGAAGCTTCCTGCGTCGTTGGCTTAGATTCCCTTCGTAAATTATGCAAAGCCTACAAATCAATCTTCAAAAGATGGTTACGTCGTAAGAAGCAACGATTTTCATCCTCAACGAGAAAATACAACCAACAATCTCACAACCATCTTCATCATCAGGTAATCACACAAATAGGATCGAATAACGACGATGGTTCTAGAAACAACAATAATGGTCCATCAACGAGTTCAAGAAGATTATCAAGCTTGCATTCACAAAGACATAGGGCTAGCAGAAGCTGTGAATCCATACCCGCATCACTGTTATGGAGCAAAAATGGCAGCGGTTGCAACAGTTTCAACCTACCGCCGCCGCAACTCTCGAGAAGCTCGAGTGCTCGGAAGAGCTTCTCTTCTACAATCATGTATTCCAGTTCATCGTCTGCGATGCTAAAACCGCAACCCATCGAGATGACGGTTGAGTGCACCCTTGAGGAGTTGTGCCATGGATGCATTAAGAAGTTCAAGATCAAAAGAGATGTCATCACTCCTAATGGGGAAATGTCTCAAGAAGAAGAGATCGTAACGTTAAATGTGGAGCCAGGATGGAGAACTGGTACAAAAATTACATTTGAAAGTTCCGGAAATGTTAGAGCTGGTTTATACCGAGAAGACGTAATATTTTCTATATGGGAGAAAAAGCACCAATTATTCCGAAGAGAAGGTGATGATTTGGAATTGGTGCTTGAAATTCCCTTGGTAAAAGCACTCAGTGGAGGCATAATACCGATCCCATTATTGGGGGGAGAAGAGATGAACGTGAGTTTTGAAGAAGATATCATATTCCCTGGTTTTGAGAAAGTAATCTCTGGCCAGGGCATGCCAATTTTCAATGATCCAGACAAGAGAGGAGACTTGAGAATTAAGTTTCTTGTTGAGTTTCCAACATATCTCACTGATCAACAACGGGCTGAGGTTGTTAGCATATTACAAGAGTAG 978 0.4202 MVEASCVVGLDSLRKLCKAYKSIFKRWLRRKKQRFSSSTRKYNQQSHNHLHHQVITQIGSNNDDGSRNNNNGPSTSSRRLSSLHSQRHRASRSCESIPASLLWSKNGSGCNSFNLPPPQLSRSSSARKSFSSTIMYSSSSSAMLKPQPIEMTVECTLEELCHGCIKKFKIKRDVITPNGEMSQEEEIVTLNVEPGWRTGTKITFESSGNVRAGLYREDVIFSIWEKKHQLFRREGDDLELVLEIPLVKALSGGIIPIPLLGGEEMNVSFEEDIIFPGFEKVISGQGMPIFNDPDKRGDLRIKFLVEFPTYLTDQQRAEVVSILQE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2717 325 SUPERFAMILY HSP40/DnaJ peptide-binding domain 148 228 IPR008971 GO:0006457|GO:0051082
Amo17g2717 325 Gene3D - 146 226 - -
Amo17g2717 325 MobiDBLite consensus disorder prediction 58 89 - -
Amo17g2717 325 SUPERFAMILY HSP40/DnaJ peptide-binding domain 231 317 IPR008971 GO:0006457|GO:0051082
Amo17g2717 325 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 12 323 - -
Amo17g2717 325 CDD DnaJ_C 147 311 - -
Amo17g2717 325 Gene3D - 228 309 - -
Amo17g2717 325 Pfam DnaJ C terminal domain 149 308 IPR002939 -
Amo17g2717 325 MobiDBLite consensus disorder prediction 58 81 - -
Amo17g2717 325 PANTHER DNAJ CHAPERONE C-TERMINAL DOMAIN-CONTAINING PROTEIN 12 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2717 Amo-Chr17 127916475 127918569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2717 K09519 - gmx:100782604 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0617 08 11025349 11025825 Amo17g2717 17 127916475 127918569 hybridization