Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0617 ATGATAAATCCTCTTGATTTTGATGGTGTGTATAGGGAAATGTCTCAAGAAGAAGAGATCGTAACGTTAAATGTGGAGCCAGGATGGAGAACTGGTACAAAAATTACATTTGAAAGTTCCGGAAATGTTAGAGCTGGTTTATACCGAGAAGACGTAATATTTTCTATATGGGAGAAAAAGCACCAATTATTCCGAAGAGAAGGTGATGATTTGGAATTGGTGCTTGAAATTCCCTTGGTAAAAGCACTCAGTGGAGGCATAATACCGATCCCATTATTGGGGGGAGAAGAGATGAACGTGAGTTTTGAAGAAGATATCATATTCCCTGGTTTTGAGAAAGTAATCTCTGGCCAGGGCATGCCAATTTTCAATGATCCAGACAAGAGAGGAGACTTGAGAATTAAGTTTCTTGTTGAGTTTCCAACATATCTCACTGATCAACAACGGGCTGAGGTTGTTAGCATATTACAAGAGTAG 477 0.392 MINPLDFDGVYREMSQEEEIVTLNVEPGWRTGTKITFESSGNVRAGLYREDVIFSIWEKKHQLFRREGDDLELVLEIPLVKALSGGIIPIPLLGGEEMNVSFEEDIIFPGFEKVISGQGMPIFNDPDKRGDLRIKFLVEFPTYLTDQQRAEVVSILQE* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0617 158 CDD DnaJ_C 16 144 - -
Amo08g0617 158 Gene3D - 6 60 - -
Amo08g0617 158 PANTHER DNAJ CHAPERONE C-TERMINAL DOMAIN-CONTAINING PROTEIN 14 156 - -
Amo08g0617 158 SUPERFAMILY HSP40/DnaJ peptide-binding domain 64 150 IPR008971 GO:0006457|GO:0051082
Amo08g0617 158 Pfam DnaJ C terminal domain 15 141 IPR002939 -
Amo08g0617 158 SUPERFAMILY HSP40/DnaJ peptide-binding domain 15 61 IPR008971 GO:0006457|GO:0051082
Amo08g0617 158 Gene3D - 61 142 - -
Amo08g0617 158 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 14 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0617 Amo-Chr8 11025349 11025825 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0617 K09519 - gmx:100782604 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0617 08 11025349 11025825 Amo17g2717 17 127916475 127918569 hybridization