Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2702 ATGGCCTCAAGTTCAGTTCCTTCTGAACTTGAGTCAGTTTTGAGGTTGAGGACTGTTGATTACTTTATTACGAGGAGGCCATGGCTTGATCTTTATGGAGTTAATGTGAGACCTGTGGCGCCATTTGGAAGTGCAAGTAGAAAGCCTTATGTGGAATCTGCACTCATTCATCAATGCTTACCAGATGAGCTGCTTTTTGAGGTCTTTGCTCGAATGACTCCATATGACTTGGGAAAGGCATCTTGTGTGTGTCGAAAATGGAGGTACACAATTCGTAACCCTCTCTCTGGAGTGGTAGAAAACTATAGGATTCTTCAATCAAAATATGATGGCTCATGGCGTAAAATGTGCTCTCACGACCAAGGTTGCGAACTGATGCGGAGTTGCAGAGTGGAAATTACTAATCCAGTTCATCTGGTCTGCTATTTCCGGTACATGAGATTTTTCCCTTCTGGACGATTTCTTTATAAGTTCATGAACTTTCGATCATCTAAAGTAGACTCTGTTTTTGGTGGCCACTACACATTGTCAGATGACAAGGGTGAAGTTGAAGCTGCTGTCTTGTATCCAGGCATGCGACCTACTGTCTTGAGAATTCGCTTGAGAGTTAGAGGAACAACTCCAGGGGCCAACAATCGGATGGATTTGATTTCACTTGTCACCAGTGGTGTGAACAATAGTGAGGCAAGTGCACCCGAGGAGGACATTCTTGGTGTAGTTGAAGAGTGGCGGGATGATGATGAAACACACAACCCAGATGTGGAGACATCAGTGTTCAATCTTCCTGTGGAAAAATGA 798 0.4398 MASSSVPSELESVLRLRTVDYFITRRPWLDLYGVNVRPVAPFGSASRKPYVESALIHQCLPDELLFEVFARMTPYDLGKASCVCRKWRYTIRNPLSGVVENYRILQSKYDGSWRKMCSHDQGCELMRSCRVEITNPVHLVCYFRYMRFFPSGRFLYKFMNFRSSKVDSVFGGHYTLSDDKGEVEAAVLYPGMRPTVLRIRLRVRGTTPGANNRMDLISLVTSGVNNSEASAPEEDILGVVEEWRDDDETHNPDVETSVFNLPVEK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2702 265 PANTHER F-BOX ONLY PROTEIN 9 14 250 - -
Amo17g2702 265 PANTHER F-BOX ONLY PROTEIN 48-RELATED 14 250 IPR045118 GO:0019005|GO:0031146
Amo17g2702 265 SMART fbox_2 60 100 IPR001810 GO:0005515
Amo17g2702 265 SUPERFAMILY F-box domain 57 117 IPR036047 GO:0005515
Amo17g2702 265 Pfam F-box domain 59 94 IPR001810 GO:0005515
Amo17g2702 265 Gene3D - 57 95 - -
Amo17g2702 265 ProSiteProfiles F-box domain profile. 54 105 IPR001810 GO:0005515
Amo17g2702 265 Pfam F-box only protein C-terminal region 130 254 IPR045464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2702 Amo-Chr17 127437673 127441303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2702 K10295 - gmx:100800263 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0645 08 11548851 11553103 Amo17g2702 17 127437673 127441303 hybridization