Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0645 ATGGCCTCAAGTTCAGATTTTGCGTTATCAGTTCCTTCTGAACTTGAGTCAGTTTTGAGGTTGAGGACTGTTGATTACTTTATTACGAGGAGGCCATGGCTTGATCTTTATGGAGTTAATGTGAGACCTGTGGCGCCATTTGGAAGTGCAAGTAGAAAGCCTTATGTGGAATCTGCACTCATTCACCAATGCTTACCAGATGAGCTGCTTTTTGAGGTCTTTGCTCGAATGACTCCATATGACTTGGGAAAGGCATCTTGTGTGTGTCGAAAATGGAGGTACACAATTCGTAACCCTGTATTTTGGCGCGTTGCATGCTTGAAGGCTTGGCAGCTCTCTGGAGTGGTAGAAAACTATAGGATTCTTCAATCAAAATATGATGGCTCATGGCGTAAAATGTGGCTCTCACGACCAAGGTTGCGAACTGATGGTATTTATGTGAGTAGAAATACCTACATTCGAGCCGGAGTTGCAGAGTGGAAAATTACTAATCCAGTTCATCTGGTCTGCTATTTCCGGTACATGAGATTTTTCCCTTCTGGGCGATTTCTTTATAAGAATTCTTCTCAAAAGATCAAGGATGTGGTGAAGTTCATGAACTTTCGATCATCTAAAGTAGACTCTGTTTTTGGTGGCCACTACACATTATCAGATGACAAGGTTGAAGCTGCTGTCTTGTATCCAGGCATGCGACCTACTGTCTTGAGAATTCGCTTGAGTGTTAGAGGAACAACTCCAGGGGCCAACAATCGGATGGATTTGATTTCGCTTGTCACGAGTGGTGTGAACAATAGCGAGGCAAGTGCACCCGAGGAGGACATTCTTGGTGTAGTTGAAGGATGGCGGGATGATGAAACACACAACCCAGATGTGCCTGCAGTCTCACATAAGAGGGGCATGACTCCTTTTGTCTTTGTTCCATTTGACCAGGTGGAGACATCAGTGTTCAATCTTCCTGTGGAAAAAATGGATTATTATGTACCTGGTTGA 990 0.4394 MASSSDFALSVPSELESVLRLRTVDYFITRRPWLDLYGVNVRPVAPFGSASRKPYVESALIHQCLPDELLFEVFARMTPYDLGKASCVCRKWRYTIRNPVFWRVACLKAWQLSGVVENYRILQSKYDGSWRKMWLSRPRLRTDGIYVSRNTYIRAGVAEWKITNPVHLVCYFRYMRFFPSGRFLYKNSSQKIKDVVKFMNFRSSKVDSVFGGHYTLSDDKVEAAVLYPGMRPTVLRIRLSVRGTTPGANNRMDLISLVTSGVNNSEASAPEEDILGVVEGWRDDETHNPDVPAVSHKRGMTPFVFVPFDQVETSVFNLPVEKMDYYVPG* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0645 329 ProSiteProfiles F-box domain profile. 59 105 IPR001810 GO:0005515
Amo08g0645 329 PANTHER F-BOX ONLY PROTEIN 9 14 313 - -
Amo08g0645 329 Gene3D - 49 143 - -
Amo08g0645 329 PANTHER F-BOX ONLY PROTEIN 48-RELATED 14 313 IPR045118 GO:0019005|GO:0031146
Amo08g0645 329 Pfam F-box only protein C-terminal region 119 329 IPR045464 -
Amo08g0645 329 Pfam F-box domain 64 103 IPR001810 GO:0005515
Amo08g0645 329 SMART fbox_2 65 105 IPR001810 GO:0005515
Amo08g0645 329 SUPERFAMILY F-box domain 62 141 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0645 Amo-Chr8 11548851 11553103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0645 K10295 - gmx:100800263 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0645 08 11548851 11553103 Amo17g2702 17 127437673 127441303 hybridization