Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2600 ATGGATATATGGGACAGTTGGTGGGTTTTGCAGTTCATGCAGATGCTGGGTTTGCTGAGTTTCTGGATTTCATTACCAAAGTTGAGAACTTTATTCTCAAAAGCTTTTGGCTTTGGCAACAAATTCATGAAGGGTAGCAGCAGCAATGTCTGGATCTTTGTTTCCATATCGCTTCTCTTGTTCCTTTCTTGGGTATACTCATTCGTGTTTCCCAGTGATCTTTCTGTGATTCAGCATTATGATGAGATAATCCCCAACACTCAGTCACTGAATCAAAGTGTTGAGGTTCCCAATGTTTCTCATTCAATGAACCAAAGTTTTGATTTTGAGATGCTGAAATCCAAAGTTGTTCCAATGGGGAAGTGTAATGTGTTTGAAGGAAGTTGGATCCATGATAATAGCTACCCTCTATATGATGCTTCTCAATGTCCATTTGCTGAAAGGGGTTTCAATTGCATAGCTAATGGGCGTAGGGATAGAGGTTATACAAAGTGGAGGTGGAAGCCTAAGAATTGTGATGTTCCGAGGTTCAATGCCCGGWGASTACTCGAACAGCTTCGAGGGAAAAGGGTAGTTTTTGTTGGTGATTCATTGAGTAGGACTCAATGGGAGTCTTTGATATGTTTGTTAATGACAGGAGTTGAGGATAAGAAGAGTYTGTATGAAATCAAGGGCAATAGGATCACCAAACAGATTAGGTTTCTTGGTGTGAGGTTTAGTACTTTCGATTTGAGGATCGATTTTTATCGATCAGTGTTCCTTGTGAGGCCTGGTTCTGTGCCTAAGCATTCACCCCAAAGGATTAAGACAACATTGAGATTGGACAAGATTGATGATATTAGCCATGAGTGGATTGATTCAGATGTTCTAATATTCAATTCAGGTCATTGGTGGACAAGGACTAAGCTTTTTGACATGGGTTGGTACTTTCAGGTTGGTAGCTCAGTGAAGCTTGGAATGACAATCAATTCTGCTTATAACACAGCCCTTAACACCTGGGCATCTTGGGTGGAGAATTCAGTCAACATGAATAGAACAAGAGTGTTCTTCCGTACCTTTGAATCATCTCATTGGAGTGGAAAGAACCACAATGCATGCAAAGTGAGTAGGAATCCATGGAAGAGAAGCAATGGGAAGGAGCGAAGCCCTATATCAGATATGATCAATAGGGTTGTGAAGAACATGAGTGTSCCAGTAACAGTTTTGCATGTAACACCAATGAGTTCTTATAGGAGTGATGGTCATGTGGGAACTTGGAGTGACAATCCATCTGTTCCTGATTGCAGCCATTGGTGTCTCCCTGGTGTTCCTGATATGTGGAACGAAATTCTCTTCTCTTATTTGCTTCCAAAACCTCTCTAG 1362 0.4112 MDIWDSWWVLQFMQMLGLLSFWISLPKLRTLFSKAFGFGNKFMKGSSSNVWIFVSISLLLFLSWVYSFVFPSDLSVIQHYDEIIPNTQSLNQSVEVPNVSHSMNQSFDFEMLKSKVVPMGKCNVFEGSWIHDNSYPLYDASQCPFAERGFNCIANGRRDRGYTKWRWKPKNCDVPRFNARXXLEQLRGKRVVFVGDSLSRTQWESLICLLMTGVEDKKSLYEIKGNRITKQIRFLGVRFSTFDLRIDFYRSVFLVRPGSVPKHSPQRIKTTLRLDKIDDISHEWIDSDVLIFNSGHWWTRTKLFDMGWYFQVGSSVKLGMTINSAYNTALNTWASWVENSVNMNRTRVFFRTFESSHWSGKNHNACKVSRNPWKRSNGKERSPISDMINRVVKNMSVPVTVLHVTPMSSYRSDGHVGTWSDNPSVPDCSHWCLPGVPDMWNEILFSYLLPKPL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2600 453 Pfam PMR5 N terminal Domain 121 173 IPR025846 -
Amo17g2600 453 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 110 449 - -
Amo17g2600 453 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 110 449 IPR029962 GO:0016413
Amo17g2600 453 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 174 446 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2600 Amo-Chr17 125159006 125161691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2600 - - gmx:100784384 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2600 17 125159006 125161691 Amo17g2600 17 125159006 125161691 ECH
Amo08g0581 08 10643997 10646424 Amo17g2600 17 125159006 125161691 hybridization