Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0581 ATGGATATATGGGACAGTTGGTGGGTTTTGCAGTTCATGCAGATGCTGGGTTTGCTGAGTTTCTGGATTTCATTACCAAAGTTGAGAACTTTATTCTCAAAAGCTTTTGGCTTTGGCAACAAATTCATGAAGGGTAGCAGCAGCAATGTCTGGATCTTTGTTTCCATATCGCTTCTCTTGTTCCTTTCTTGGGTATACTCATTCGTGTTTCCCAGTGATCTTTCTGTGATTCAGCATTATGATGAGATAATCCCCAACACTTCTCAGTCACTGAATCACAGTGTTGAGGTTCCCAATGTTTCTCATTCAATGAACCAAAGTTTTGATTTTGAGATGCTGAAATCCAAAGTTGTTCCAATGGGGAAGTGTAATGTGTTTGAAGGAAGTTGGATCCATGATAATAGCTACCCTCTATATGATGCTTCTCAATGTCCATTTGCTGAAAGGGGTTTCAATTGCATAGCTAATGGGCGTAGGGATAGAGGTTATACAAAGTGGAGGTGGAAGCCTAAGAATTGTGATGTTCCGAGGTTCAATGCCCGGCGAATACTCGAACAGCTTCGAGGGAAAAGGGTAGTTTTTGTTGGTGATTCATTGAGTAGGACTCAATGGGAGTCTTTGATATGTTTGTTAATGACAGGAGTTGAGGATAAGAAGAGTATGTATGAAATCAAGGGCAATAGGATCACCAAACAGATTAGGTTTCTTGGTGTAAGGTTTAGTACTTTCGATTTGAGGATCGATTTTTATCGATCAGTGTTCCTTGTGAGGCCTGGTTCTGTGCCTAAGCATTCACCCCAAAGGATTAAGACAACATTGAGATTGGACAAGATTGATGATATTAGCCATGAGTGGATTGATTCAGATGTTCTAATATTCAATTCAGGTCATTGGTGGACAAGGACTAAGCTTTTTGACATGGGTTGGTACTTTCAGGTTGGTAACTCAGTGAAGCTTGGAATGACAATCAATTCTGCTTATAACACAGCCCTTCACACCTGGGCATCTTGGGTGGAGAATTCAGTCAACATGAATAGAACAAGAGTGTTCTTCCGTACCTTTGAATCATCTCATTGGAGTGGAAAGAACCACAATGCATGCAAAGTGAGTAGGAATCCATGGAAGAGAAGCAATGGGAAGGAGCGAAGCCCTATATCAGATATGATCAACAGGGTTGTGAAGAACATGAGTGTTCCAGTAACAGTTTTGCATGTAACACCAATGAGTTCTTATAGGAGTGATGGTCATGTAGGAACTTGGAGTGACAATCCATCTGTTCCTGATTGCAGCCATTGGTGTCTCCCTGGTGTTCCTGATATGTGGAACGAAATTCTCTTCTCTTATTTGCTTCCAAAACCTCTCTAA 1365 0.411 MDIWDSWWVLQFMQMLGLLSFWISLPKLRTLFSKAFGFGNKFMKGSSSNVWIFVSISLLLFLSWVYSFVFPSDLSVIQHYDEIIPNTSQSLNHSVEVPNVSHSMNQSFDFEMLKSKVVPMGKCNVFEGSWIHDNSYPLYDASQCPFAERGFNCIANGRRDRGYTKWRWKPKNCDVPRFNARRILEQLRGKRVVFVGDSLSRTQWESLICLLMTGVEDKKSMYEIKGNRITKQIRFLGVRFSTFDLRIDFYRSVFLVRPGSVPKHSPQRIKTTLRLDKIDDISHEWIDSDVLIFNSGHWWTRTKLFDMGWYFQVGNSVKLGMTINSAYNTALHTWASWVENSVNMNRTRVFFRTFESSHWSGKNHNACKVSRNPWKRSNGKERSPISDMINRVVKNMSVPVTVLHVTPMSSYRSDGHVGTWSDNPSVPDCSHWCLPGVPDMWNEILFSYLLPKPL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0581 454 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 175 447 IPR026057 GO:0016740
Amo08g0581 454 Pfam PMR5 N terminal Domain 122 174 IPR025846 -
Amo08g0581 454 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 112 450 IPR029962 GO:0016413
Amo08g0581 454 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 112 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0581 Amo-Chr8 10643997 10646424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0581 - - gmx:100784384 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0581 08 10643997 10646424 Amo17g2600 17 125159006 125161691 hybridization