Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2571 ATGAAGAGGAAAAGGGATATGGAGAAGAAGAGTTCAGAGATAAGCTCTGCCATTGAAGAGTTATCTATGATGGTTGTTGTTAAACCTTCTGCAGTTGGAGGGAATCATGAACATCATGAAGATGGTGCTTCTGCTACAGAACAAATCCCCACAAAGCCTTTTCTATCTATATGTCACTTGGTTCTACAAGTTCTTGATAAGATAGGGCCAACCATGGCTGTCTTGAGACAAGACATTCACCAGAATATTAAGAGATTGGAATTGATGTATGAATCAAACCCATCATTGAATTCAAATTTGGTTGAGATGTTGAAATTAGAAGCTAGTAAAGGCACTGCAAGGAAGAGGTGTAGTTGTAGTAAAGCCCTTGTTTGGCTCACAAGATCCCTTGATTTTGCCATGGCTCTGTTACAGTCACTTGCAAAAGATCCTAACAAGAGTATGGAACAAGTAGTTGAAGAATCTTATGCTGCAACTTTGACTCCATGGCATGGATGGATTTCCTCAGCTGCTTTTAGAGTGGCTATAAAACTAGTCCCAGATCGCAAAACTTTCATGAATCTCCTTAGAGAAAAAGATGAAACTTGTGAGGCCCTAAAGGAGAAAATGCAGATGTTGGTTTCTTTGCTTGTTCCTTTTCTTGAAGATATCCATTGTATTCTAGTAAGCCTCAATTTTCATTCTTCATAA 690 0.387 MKRKRDMEKKSSEISSAIEELSMMVVVKPSAVGGNHEHHEDGASATEQIPTKPFLSICHLVLQVLDKIGPTMAVLRQDIHQNIKRLELMYESNPSLNSNLVEMLKLEASKGTARKRCSCSKALVWLTRSLDFAMALLQSLAKDPNKSMEQVVEESYAATLTPWHGWISSAAFRVAIKLVPDRKTFMNLLREKDETCEALKEKMQMLVSLLVPFLEDIHCILVSLNFHSS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2571 229 Gene3D Glycolipid transfer protein 3 227 IPR036497 -
Amo17g2571 229 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 4 227 - -
Amo17g2571 229 SUPERFAMILY Glycolipid transfer protein, GLTP 45 227 IPR036497 -
Amo17g2571 229 Pfam Glycolipid transfer protein (GLTP) 49 190 IPR014830 GO:0005737|GO:0120009|GO:0120013
Amo17g2571 229 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 4 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2571 Amo-Chr17 124574909 124576863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2571 44 223 Acyl Lipid Metabolism Gene Families AT2G34690 25.414 2.63e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2571 - - gmx:100806166 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2571 17 124574909 124576863 Amo17g2571 17 124574909 124576863 ECH
Amo08g0589 08 10732447 10734385 Amo17g2571 17 124574909 124576863 hybridization