Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0589 ATGAAGAGGAAAAGGGATATGGAGAAGAAGAGTTCAGAGATAAGCTCTGCCATTGAAGAGTTATCTATGATGGTTGTTGTTAAACCTTCTGCAGTTGGAGGGAATCATGAACATCATGAAGATGGTGCTTCTGCTACAGAACAAATCCCYACAAAGCCTTTTCTATCTATATGTCACTTGGTTCTACAAGTTCTTGATAAGATAGGGCCAACCATGGCTGTCTTGAGACAAGACATTCACCAGAATATTAAGAGATTGGAATTGATGTATGAATCAAACCCATCATTGAATTCAAATTTGGTTGAGATGTTGAAATTAGAAGCTAGTAAAGGCACTGCAAGGAAGAGGTGTAGTTGTAGTAAAGCCCTTGTTTGGCTCACAAGATCCCTTGATTTTGCCATGGCTCTGTTACAGTCACTTGCAAAAGATCCTAACAAGAGTATGGAACAAGTAGTTGAAGAATCTTATGCTGCAACTTTGACTCCATGGCATGGATGGATTTCCTCAGCTGCTTTTAGAGTGGCTATAAAACTAGTCCCAGATCGCAAAACTTTCATGAATCTCCTTAGAGAAAAAGATGAAACTTGTGAGGCCCTAAAGGAGAAAATGCAGATGTTGGTTTCTTTGCTTGTTCCTTTTCTTGAAGATATCCATTGTATTCTAAAAGTGTATAACTTGGACAGGCTGAAGTCAACCTGA 699 0.3906 MKRKRDMEKKSSEISSAIEELSMMVVVKPSAVGGNHEHHEDGASATEQIPTKPFLSICHLVLQVLDKIGPTMAVLRQDIHQNIKRLELMYESNPSLNSNLVEMLKLEASKGTARKRCSCSKALVWLTRSLDFAMALLQSLAKDPNKSMEQVVEESYAATLTPWHGWISSAAFRVAIKLVPDRKTFMNLLREKDETCEALKEKMQMLVSLLVPFLEDIHCILKVYNLDRLKST* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0589 232 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 4 229 - -
Amo08g0589 232 SUPERFAMILY Glycolipid transfer protein, GLTP 45 229 IPR036497 -
Amo08g0589 232 Pfam Glycolipid transfer protein (GLTP) 49 190 IPR014830 GO:0005737|GO:0120009|GO:0120013
Amo08g0589 232 Gene3D Glycolipid transfer protein 3 228 IPR036497 -
Amo08g0589 232 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 4 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0589 Amo-Chr8 10732447 10734385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0589 44 214 Acyl Lipid Metabolism Gene Families AT2G34690 26.163 3.50e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0589 - - gmx:100806166 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0589 08 10732447 10734385 Amo17g2571 17 124574909 124576863 hybridization