Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2441 ATGAAGCTTTGGCCATGGCCTTGGGCCACTTCCATATCTACCCTCTTCTTCATCGTTGTTTCCACCTTCCTTGTCCTTCGGTTCTTCCGCAAAACCTCTGCTCTCCAAATCCTCAATAAATGGTGGCTCTCCTTCGAGGACCGACTCCACGTCCACCAGTCCTTCAAAGTCCCACTCTACAACCACCATTTCCAGGAGAATCATCTCTACCGGAAAATCCTCACCTACCTCGATTCTCTCCCTTCGGTACAAGACTCCGATTACACTAACCTCTTCTCCGGCCACAACCCCGCAGATATCTACCTCCACCTCGACGCCAACCAGACCATTCAGGACATCTTCCTCGGCGCCAAGCTCTCTTGGACCAAGACCAATGACGCCGTCATCGGCGGCGTCGGTTCCGATTCCGCCGCTCTCGTGCTCCGAATCAAGAAGAAGGACAAGCGCAGGGTTTTCCGGCAGTACTTCCAGCACATTCTTTCCGTGGCGGAGGAAATTGAACTGCGAAGGAAGGAGATCAGGCTGTACACGAACTCCAGCGCCGGCGAGTCGTCGCGGTGGAGGTCGGTCGCGTTCACGCATCCGGCGAGCTTCGATACGGTGGCGATGGACGCCGAGCTGAAGAACAAGGTGAAATTGGATCTGGACCAGTTCCTCAAGTCAAAGCAGTACTATCACCGGTTAGGCCGCGTTTGGAAGCGGAGCTACCTCCTCTACGGTGCCTCCGGCACGGGGAAATCGAGCTTCATCGCCGCGATGGCGAAGTTCCTTTGCTACGACATCTACGACATCGATGTTTCGAAGGTAACCGACGGATCCAATTGGAAAACTCTGCTGATGCAAACGACGAGCAAATCGATGATTGTGATCGAGGACCTAGACCGGTTGCTGTCTGGAAAGTCAACGGCGGTGATCAGCGTTTCGAGCATGCTGAACTTCATGGACGGCATCGTTTCGTGCTGCGGCGAGGAGCGCGTGATGGTGTTCACGATGAACGGCACGAAGGATGAGGTGGATCAAGCGGTGCTGAGGCCTGGTAGGGTTGACGTTCACATACACTTTCCCTTATGCGATTTCTCAACGTTCAAGATTCTCGCGAGCAGTTACCTAGGGCTTAAGGAACACAAGCTTTTCACTCAGGTGGAGGAAGTTTTCCAGACTGGGGCACGGCTTAGCCCTGCCGAAGTCGGCGAGATTATGATATCGAACCGGAATTCACCGACTCGGGCCTTGAAAACGGTTATAACGGCTTTGCAGGCTCAATCAAACGGTGGTGGTGATTCGAGGAGAGCAAGAGGGGGAGGGAGGTTGAGTGAGAGCGGCTCGGGTCGGAGCAGTGATGATAACGAACCGGGTGCGGTTATATGTAGGGAAAGCTTTCATACTGTAAGGGAGTTCCGGAAGTTGTATGGGCTTCTGCGGATGGGAAGTAGGAGGAAGGAGGAGAAGGAATATTCGGGGCCCATTGAGAAGGATACTCAATCAATTGAGGGAAGGGTCGGGTGA 1506 0.5392 MKLWPWPWATSISTLFFIVVSTFLVLRFFRKTSALQILNKWWLSFEDRLHVHQSFKVPLYNHHFQENHLYRKILTYLDSLPSVQDSDYTNLFSGHNPADIYLHLDANQTIQDIFLGAKLSWTKTNDAVIGGVGSDSAALVLRIKKKDKRRVFRQYFQHILSVAEEIELRRKEIRLYTNSSAGESSRWRSVAFTHPASFDTVAMDAELKNKVKLDLDQFLKSKQYYHRLGRVWKRSYLLYGASGTGKSSFIAAMAKFLCYDIYDIDVSKVTDGSNWKTLLMQTTSKSMIVIEDLDRLLSGKSTAVISVSSMLNFMDGIVSCCGEERVMVFTMNGTKDEVDQAVLRPGRVDVHIHFPLCDFSTFKILASSYLGLKEHKLFTQVEEVFQTGARLSPAEVGEIMISNRNSPTRALKTVITALQAQSNGGGDSRRARGGGRLSESGSGRSSDDNEPGAVICRESFHTVREFRKLYGLLRMGSRRKEEKEYSGPIEKDTQSIEGRVG* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2441 501 CDD AAA 233 356 - -
Amo17g2441 501 SMART AAA_5 232 358 IPR003593 -
Amo17g2441 501 PANTHER BNAANNG18710D PROTEIN 17 432 - -
Amo17g2441 501 PANTHER BCS1 AAA-TYPE ATPASE 17 432 - -
Amo17g2441 501 MobiDBLite consensus disorder prediction 420 453 - -
Amo17g2441 501 MobiDBLite consensus disorder prediction 477 501 - -
Amo17g2441 501 Pfam ATPase family associated with various cellular activities (AAA) 237 356 IPR003959 GO:0005524|GO:0016887
Amo17g2441 501 Gene3D - 354 419 - -
Amo17g2441 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 417 IPR027417 -
Amo17g2441 501 Pfam Domain associated at C-terminal with AAA 34 122 IPR025753 -
Amo17g2441 501 Gene3D - 188 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2441 Amo-Chr17 121312140 121314247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2441 198 352 Miscellaneous Gene Families AT2G29080 28.070 2.34e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2441 - K08900 gmx:100797983 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2441 17 121312140 121314247 Amo17g2441 17 121312140 121314247 ECH
Amo10g1618 10 56132186 56134122 Amo17g2441 17 121312140 121314247 hybridization