Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2438 ATGCTTGATTCACTCACAGGTGAGGATTTGATGAATCCAATGGAAATCAATAGTATAAACAGTGAAGATCTCAAAGAAATTGAGAATTGCAACAGAGAGGACCCTGAACAGCCGCAGATTGAGGGTGAGGAGCTGAACAGGATAGCTACATGGGGAAAGCACATCACTGTCCGGGGACTAATAGCTAGCTTACTGATTGGAATCATTTACAGTGTGATAGTGATGAAGCTGGGCCTTACAACTGGACTAGTACCTAATCTCAATGTCTCGGCTGCACTTCTTGGCTTTGTGTTCATTAGGACTTGGACTAAGCTCCTTTCCAAAGCCAATATTATTTCAACACCTTTCACTCGGCAGGAGAATACCGTAATCCAGACTTGTGCAGTGGCTTGCTACAGCATCGCCATAGCAGGTGGTTTTGGTTCTTATCTCTTGGGATTGAATAGGAGGACATATGAGCAAGCAGGGATTGATACAGAAGGGAATACACCTAACAGCATCAAGGAACCTGGAATCGGCTGGATGACAGCCTTTCTCTTCGTTACCAGTTTTGTAGGGCTATTGGCGCTGGTCCCCATAAGAAAGATAATGATAATAGACTACAAATTGACTTATCCCAGTGGAACAGCTACTGCAATTCTTATTAATGGATTCCATACTCCTAAAGGAGACGCCATGGCCAAGAAGCAGGTTCACGGTTTCATGAAATACTGCTCATTCAGTTTCCTTTGGGGATTCTTTCAATGGTTTTATACGGGTGGAGATCAGTGTGGGTTTGTTCAGTTTCCAACTTTTGGATTGAAAGCTTGGAAAAACTCATTTTACTTTGATTTCAGCATGACTTATGTTGGAGCAGGAATGATTTGCTCCCATCTTGTAAATCTATCCTTGCTTCTCGGTGCTGTGCTTTCGTGGGGCATTATGTGGCCATTAATCGGCAGACTAAAAGGCGAATGGTTCCCTGCGAGCCTACCAGAAAGTAGCATGAAGAGTCTTAATGGTTATAAGGTCTTTGTTTCAATCGCCTTGATCCTTGGTGATGGGATCTATAATTTTGTCAAAATTCTCTGTTTCACAGCCATTAATATCTATGCAAGCATGCAAAAGAAGAAGCGTAATACATATTTGGAGAACCAGAGGCAGCTGTCTCATGACGAATTTAGACAGAATGAAGTGTTTATAAGAGATAGCATTCCAGTATCGTTGGCGGTTGCAGGGTACATATTGCTCAGCATCATTTCCATCATTGTGATACCTTTGATGTTCCCCCAAATGAAGTGGTATTTTGTGGTGGTTGCCTATATTCTTGCACCTGCTCTTGGATTTTGCAATGCTTATGGTGCAGGATTAACTGACATGAACATGGCTTATAACTATGGCAAAGTGGCTCTCTTTGTGCTTGCATCCTTGGCCGGAAAAACTGACGGTGTAGTTGCAGGGCTTGTGGGGTGTGGCTTGATCAAATCAATTGTTTCCATTTCTTCTGATTTGATGCATGATTTCAAGACCGGCCATCTCACTTTCACATCCCCTCGTTCAATGCTTCTAAGCCAAGCAATCGGCACAGGGATAGGCTGTGTTGTGGCTCCACTCACATTCTTCCTTTTCTACAATGCCTTTGATGTTGGGAAACCAGATGGTGATTACAAGGCCCCATATGCCCTCATTTATAGAAACATGGCCATTCTTGGCGTCGAAGGCTTTTCCGCCCTCCCCCATCATTGCCTGCAACTTTGTTATGGTTTTTTCGCGTTTGCGATAGCAGCCAACTTGGTGAGGGATCTTTCCCCCAAGAAAGTTGGAAGATGGATTCCACTTCCAATGGCAATGGCTGTCCCTTTCTTAGTTGGTGGATACTTTGCAATTGACATGTGTGTGGGTAGCTTGATTGTGTATTCTTGGCACACACTGAAGAGTGAGGAGGCAAATTTGATGGTTCCTGCAGTTGCTTCTGGTTTGATTTGTGGTGATGGATTATGGATTCTACCTTCATCCCTTCTCGCTTTGTTCGGGGTTCGGCCACCAATCTGCATGAGCTTCTTTACATCCAAGTAG 2055 0.438 MLDSLTGEDLMNPMEINSINSEDLKEIENCNREDPEQPQIEGEELNRIATWGKHITVRGLIASLLIGIIYSVIVMKLGLTTGLVPNLNVSAALLGFVFIRTWTKLLSKANIISTPFTRQENTVIQTCAVACYSIAIAGGFGSYLLGLNRRTYEQAGIDTEGNTPNSIKEPGIGWMTAFLFVTSFVGLLALVPIRKIMIIDYKLTYPSGTATAILINGFHTPKGDAMAKKQVHGFMKYCSFSFLWGFFQWFYTGGDQCGFVQFPTFGLKAWKNSFYFDFSMTYVGAGMICSHLVNLSLLLGAVLSWGIMWPLIGRLKGEWFPASLPESSMKSLNGYKVFVSIALILGDGIYNFVKILCFTAINIYASMQKKKRNTYLENQRQLSHDEFRQNEVFIRDSIPVSLAVAGYILLSIISIIVIPLMFPQMKWYFVVVAYILAPALGFCNAYGAGLTDMNMAYNYGKVALFVLASLAGKTDGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTFTSPRSMLLSQAIGTGIGCVVAPLTFFLFYNAFDVGKPDGDYKAPYALIYRNMAILGVEGFSALPHHCLQLCYGFFAFAIAANLVRDLSPKKVGRWIPLPMAMAVPFLVGGYFAIDMCVGSLIVYSWHTLKSEEANLMVPAVASGLICGDGLWILPSSLLALFGVRPPICMSFFTSK* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2438 684 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 21 682 IPR045035 GO:0035673
Amo17g2438 684 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 21 682 - -
Amo17g2438 684 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 53 666 IPR004813 GO:0035673
Amo17g2438 684 Pfam OPT oligopeptide transporter protein 55 667 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2438 Amo-Chr17 121275425 121278900 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2438 - - gmx:100795669 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2438 17 121275425 121278900 Amo17g2438 17 121275425 121278900 ECH
Amo08g0403 08 7738606 7741360 Amo17g2438 17 121275425 121278900 hybridization