Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0403 ATGAACAATATAAACAATGAAGAACTCAAAGAAGCTGAGAATTCTAACAGAGAGGACCTTGAAGAGGCTTCCATTGAGCCTGGGGATGTGGCTAAGATAGTTCCATGGACGAGGCAAATCACAATCCGCGGACTAGTAGCTAGTATATTGATTGGAATYATTTATAGTGTGATAGCAATGAAGCTGAACCTGACAACTGGATTAGTCCCCAATCTTAATGTTTCAGCTGCACTACTTGGCTTTGTGTTCATTAGGACYTGGACTAAGMTCCTTTCCAAAGCCAATATTGTTTCAACACCTTTCACTAGGCAGGAGAATACCGTAATCCAGACATGTTCAGTGGCGTGCTACACACTTGCAGTTGGAGGTGGTTTTAGTTCCAATCTCTTGGCCTTGAATCGGAAGACATACGAGCTAGCAGGGGTTGATACATATGGAAATAGTCCTACTAGCATCAAGGATCCTGGATTTGGCTGGATGTCATCCTTTCTCTTTGTAACTAGTTTTGTTGGGCTATTTGCATTGRTCCCCATAAGAAAGATTATGGTAATAGACTACAAATTGACTTATCCCAGTGGAACAGCTACCGCTGTTCTTATTAATGGGTTCCATACTCCTAAAGGMGATGCCATGGCCAAGTGTGAATCTGTTCCTATCCTTTTTCCCTTTTTCTTGGAGTCTTTCAAGTTGAAACAAGGTGGAGATCATTGTGGATTTGTTCAATTTCCCACTTTTGGATTGAAAGCCTGGAAAAACTCGGGACAAAAGGGAGMATGGTTCCCTACTAATCTACCAGAAAGTAGCATGAAAAGTCTAAATGGCTATAAGGTCTTTATTTCAATTGCCTTGCTTCTTGGTGATGGGCTCTACAATTTTGTGAAACTTATCTGTTCCGCAGCCTTGARGATACATGAGAACAAGAAAAGAAAAAATCTTGATACGTGTTTGGACAAGAAGAATCAGCTGCCTCTTGATGATCTTAGAAGGCATGAAGTGTTTCTAAGAGAAAGTATTCCAGTATGGTTGGCAGCTGCAGGGTATATTTTCTTCTCCGTCRTTTGTGTCATTGTAATCCCTCTGATGATTCCCCAGTTGAAGTGGTATTATGTGGYGGTTGCWTATATTCTTGCACCTGCACTTGGCTTCTGCAATGCATATGGTGCAGGCTTAACTGACATKAAYATGGCCTATAACTATGGCAAAGTGGCGCTCTTTATGGTTGCGGCCTTGGTTGGAAAGAACGATGGTGTAGTTTCTGGACTCGTGGCCTGTGGCTTGATCAAATCRATTGTTTCCATTTGTTCCGATTTGATGCACGATTTCAAAACCGGCCATCTAACTTACACGTCGCCTCGATCAATGCTTTTGAGCCAAGCAATCGGCACAGCAATAGGTTGTGTTGTTGCRCCTCTGACATTCTTCCTTTTYTACAAGGCCTTTGATGTAGGGAATCCAGATGGTGAGTACAAGGCCCCATATGCCMTCATATACAGAAACATGGCCATTCTTGGTGTTGAAGGCTTCTCCACCCTCCCCCAGCATTGCTTGCAACTTTGTTATGGTTTTTTCGCGTTTGCCATAGCAGCCAACTTAGTGAGGGATCTTTCCCCCAAGAAAGTTGGAAGATGGATTCCACTTCCAATGGCAATGGCTGTCCCTTTCTTAGTTGGTGGATACTTTGCAATTGACATGTGTGTGGGTAGCTTGATTGTGTATTCTTGGCACACACTGAAGAGTGAGGAGGCAAATTTGATGGTTCCTGCAGTTGCTTCTGGTTTGATTTGTGGTGATGGATTATGGATTCTACCTTCATCAATTCTTGCCTTATTTGGGGTTCATCCCCCAATGTGCATGAGCTTCTTTTCATCCAAGTAG 1875 0.4245 MNNINNEELKEAENSNREDLEEASIEPGDVAKIVPWTRQITIRGLVASILIGIIYSVIAMKLNLTTGLVPNLNVSAALLGFVFIRTWTKXLSKANIVSTPFTRQENTVIQTCSVACYTLAVGGGFSSNLLALNRKTYELAGVDTYGNSPTSIKDPGFGWMSSFLFVTSFVGLFALXPIRKIMVIDYKLTYPSGTATAVLINGFHTPKGDAMAKCESVPILFPFFLESFKLKQGGDHCGFVQFPTFGLKAWKNSGQKGXWFPTNLPESSMKSLNGYKVFISIALLLGDGLYNFVKLICSAALXIHENKKRKNLDTCLDKKNQLPLDDLRRHEVFLRESIPVWLAAAGYIFFSVXCVIVIPLMIPQLKWYYVXVAYILAPALGFCNAYGAGLTDXNMAYNYGKVALFMVAALVGKNDGVVSGLVACGLIKSIVSICSDLMHDFKTGHLTYTSPRSMLLSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAXIYRNMAILGVEGFSTLPQHCLQLCYGFFAFAIAANLVRDLSPKKVGRWIPLPMAMAVPFLVGGYFAIDMCVGSLIVYSWHTLKSEEANLMVPAVASGLICGDGLWILPSSILALFGVHPPMCMSFFSSK* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0403 624 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 6 253 IPR045035 GO:0035673
Amo08g0403 624 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 6 253 - -
Amo08g0403 624 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 254 622 - -
Amo08g0403 624 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 254 622 IPR045035 GO:0035673
Amo08g0403 624 Pfam OPT oligopeptide transporter protein 256 607 IPR004813 GO:0035673
Amo08g0403 624 Pfam OPT oligopeptide transporter protein 39 219 IPR004813 GO:0035673
Amo08g0403 624 MobiDBLite consensus disorder prediction 1 21 - -
Amo08g0403 624 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 256 606 IPR004813 GO:0035673
Amo08g0403 624 Coils Coil 2 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0403 Amo-Chr8 7738606 7741360 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0403 - - gmx:100820417 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0403 08 7738606 7741360 Amo17g2438 17 121275425 121278900 hybridization