Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2033 ATGGCTCCTCAGAGGCGGCGCCTCCACCATTTGCAGCGTTTCCCTCTCTTGATTCCTCTCATCTCTGCCGTCGCTGCCGCTCTTATGTTTCTCTTCGCGCTACTCTCTCTTCTAGCTCCTTCTCCCAACGAAACTAATCATATGCACCGCCCGCGCCAACGCTCTTCGTTTGACGTTCAATCGGAGGACAACGCTATTGGAGATAATGTGTTCCGCGTTCCGAAAATAATAGGAAAGTTGAATCGCGGACTCTGGAGCTTTAACAATTCCGTAAACTTCTATGGATGTAGCAACGCAAGCAGCGAGTTTCCAAAAGCTCAAGCCATTACTCATCCGGATCGGTATTTGGTAATTGCAACCAGTGGTGGCTTGAATCAACAAAGAACTGGAATTACAGATGCTGTTGTTGCTGCGCGAATTCTGAATTCTACTCTTGTTGTTCCCAAACTTGATCAACGGTCTTTTTGGAAAGATTCTAGTAACTTCTCGGAGATCTTTGATGTTGAATGGTTTATATCCTTCCTATCAAAAGATGTCAAAATTATCAAGGAACTCCCAGCAAAGGTTSGCCGAAGATCATCTCTGTACTCGWTGCGTGTTCCAAGGAAGTGTAGCGAAAGATGTTATATAAATCGTATATTACCTATACTCCAGAAAAAGCATGTTATTCAGCTCAGCAAGTATGACTACAGGCTTGCAAACAGGTTGGATCCGGAGTATCAGAAGTTAAGATGTCGAGTTAACTACCATGGGTTAAGATTTACCGACCCAATACTTGCAATGGGTAGAAAATTGGTACGTCGGATGAGGATGAGAAGCAAACATTATATCGCACTGCACCTGAGATTTGAACCCGATATGCTTGCATTTTCTGGATGCGATTATGGTGGAGGAGAGAAGGAACRGAAAGAACTGGGTGCAATAAGGAAGAGGTGGAAGACGCTACATGGAGCCAATCCTGATAAGCAAAGAAGACAGGGAAAATGCCCGTTAACCCCAGAAGAAGTTGGTCTCATGCTAAGAGCCTTGGGGTATGGTTCTGGTGTTCATATTTACGTTGCATCAGGGGAAATATATGGAGGGGAAAATACATTGGCACCTCTGAGAGCATTATTTCCTAATATCCATTCAAAAGAGACCATTGCTATTAAGGAAGAATTAGAACCATTTTCTTCATTTTCCTCTCGCATGGCGGCACTTGACTTCATTGTTTGTGATGAAAGTGACGTATTTGTGACCAATAACAATGGTAATATGGCTAAAATATTAGCTGGGCGAAGGAGATACTTTGGGCACAAACCAACCATTCGTCCAAATGCTAAAAATCTCTACCAATTGATCATGAACAGAAATAATATGACTTGGGAAGCTTTTGCTTCCCGTGTACAGACTTTTCAAAAAGGCTTCATGGGGGARCCAAATGAGGTTAGACCRGGCAGAGGCGTGTTTCATGAGAACCCATCTACCTGCATCTGTGAAGATTCTGTGCCCAAAGTGGGCCAAGATTCTGGACATAGAAAACATGGGAAGGATAATGCAATCAATGAAAATGATGATGACGAGGATTATGATGATTCTGGATTGCCAGAAATGGAGGATGATGATTACGAAAATGATGAAGATCTGAGTGATCGAGTAGAGAAGGGTACATACAACGGAACGGTGTCGGACTATGACGCAATGAACTCTCAGAATCCYGAGTTAGAAGAAGTTGTATCAGATTAG 1725 0.4296 MAPQRRRLHHLQRFPLLIPLISAVAAALMFLFALLSLLAPSPNETNHMHRPRQRSSFDVQSEDNAIGDNVFRVPKIIGKLNRGLWSFNNSVNFYGCSNASSEFPKAQAITHPDRYLVIATSGGLNQQRTGITDAVVAARILNSTLVVPKLDQRSFWKDSSNFSEIFDVEWFISFLSKDVKIIKELPAKVXRRSSLYSXRVPRKCSERCYINRILPILQKKHVIQLSKYDYRLANRLDPEYQKLRCRVNYHGLRFTDPILAMGRKLVRRMRMRSKHYIALHLRFEPDMLAFSGCDYGGGEKEXKELGAIRKRWKTLHGANPDKQRRQGKCPLTPEEVGLMLRALGYGSGVHIYVASGEIYGGENTLAPLRALFPNIHSKETIAIKEELEPFSSFSSRMAALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKNLYQLIMNRNNMTWEAFASRVQTFQKGFMGEPNEVRPGRGVFHENPSTCICEDSVPKVGQDSGHRKHGKDNAINENDDDEDYDDSGLPEMEDDDYENDEDLSDRVEKGTYNGTVSDYDAMNSQNPELEEVVSD* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2033 574 PANTHER O-FUCOSYLTRANSFERASE 16 5 574 - -
Amo17g2033 574 MobiDBLite consensus disorder prediction 494 574 - -
Amo17g2033 574 MobiDBLite consensus disorder prediction 516 541 - -
Amo17g2033 574 CDD O-FucT_plant 115 435 IPR024709 -
Amo17g2033 574 PIRSF UCP009360 2 498 IPR024709 -
Amo17g2033 574 MobiDBLite consensus disorder prediction 555 574 - -
Amo17g2033 574 Pfam GDP-fucose protein O-fucosyltransferase 115 429 IPR019378 -
Amo17g2033 574 PANTHER O-FUCOSYLTRANSFERASE 16 5 574 - -
Amo17g2033 574 MobiDBLite consensus disorder prediction 499 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2033 Amo-Chr17 103847788 103853052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2033 84 493 Miscellaneous Gene Families AT1G22460 43.409 3.97e-101 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2033 - - gmx:100787624 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2033 17 103847788 103853052 Amo17g2033 17 103847788 103853052 ECH
Amo08g0256 08 4557909 4562618 Amo17g2033 17 103847788 103853052 hybridization