Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0256 ATGGCTCCTCAGAGGCGGCGCCTCCACCATTTGCAGCGTTTCCCTCTCTTGATTCCTCTCATCTCTGCCGTCGCTGCCGCTCTTATGTTTCTCTTCGCGCTACTCTCTCTTCTAGCTCCTTCTCCCAACGAAACTAATCATATGCACCGCCCGCGCCAACGCTCTTCGTTTGACGTTCAATCGGAGGACAACGCTATTGGAGATAATGTGTTCCGCGTTCCGTTGAATCGCGGACTCTGGAGCTTTAACAATTCCGTAAACTTCTATGGATGTAGCAACGCAAGCAGCGAGTTTCCAAAAGCTCAAGCCATTACTCATCCGGATCGGTATTTGGTAATTGCAACCAGTGGTGGCTTGAATCAACAAAGAACTGGAATTACAGATGCTGTTGTTGCTGCGCGAATTCTGAATTCTACTCTTGTTGTTCCCAAACTTGATCAACGGTCTTTTTGGAAAGATTCTAGTAACTTCTCGGAGATCTTTGATGTTGAATGGTTTATATCCTTCCTATCAAAAGATGTCAAAATTATCAAGGAACTCCCAGCAAAGGTTATTCAGCTCAGCAAGTATGACTACAGGCTTGCAAACAGGTTGGATCCGGAGTATCAGAAGTTAAGATGTCGAGTTAACTACCATGGGTTAAGATTTACCGACCCAATACTTGCAATGGGTAGAAAATTGGTACGTCGGATGAGGATGAGAAGCAAACATTATATCGCACTGCACCTGAGACTCAGCAGTATGATAACCAATAAAGCTCAACTATTGCAAGCCTTGGCGATATTTTTGGATGACTGCACTGGCCTCACCCTGCCCCCTAGTGGGGCCTTCCCTAGATTTGAACCCGATATGCTTGCATTTTCTGGATGCGATTATGGTGGAGGAGAGAAGGAACGAAAGAACTGGGGAGCCAATCCTGATAAGCAAAGAAGACAGGGAAAATGCCCGTTAACCCCAGAAGAAGTTGGTCTCATGCTAAGAGCCTTGGGGTATGGTTCTGGTGTTCATATTTACGTTGCATCAGGGGAAATATATGGAGGGGAAAATACATTGGCACCTCTGAGAGCATTATTTCCTAATATCCATTCAAAAGAGACCATTGCTATTAAGGAAGAATTAGAACCATTTTCTTCATTTTCCTCTCGCATGGCGGCACTTGACTTCATTGTTTGTGATGAAAGTGACGTATTTGTGACCAATAACAATGGTAATATGGCTAAAATATTAGCTGGGCGAAGGAGATACTTTGGGCACAAACCAACCATTCGTCCAAATGCTAAAAATCTCTACCAATTGATCATGAACAGAAATAATATGACTTGGGAAGCTTTTGCTTCCCGTGTACGGACTTTTCAAAAAGGCTTCATGGGGGAGCCAAATGAGGTTAGACCGGGCAGAGGCGTGTTTCATGAGAACCCATCTACCTGCATCTGTGAAGATTCTGTGCCCAAAGTGGGCCAAGATTCTGGACATAGAAAACATGGGAAGGATAATGCAATCAATGAAAATGATGATGACGAGGATTATGATGATTCTGGATTGCCAGAAATGGAGGATGATGATTACGAAAATGATGAAGATCTGAGTGATCGAGTAGAGAAGGGTACATACAACGGAACGGTGTCGGACTATGACGCAATGAACTCTCAGAATCCGAGTTAG 1662 0.4422 MAPQRRRLHHLQRFPLLIPLISAVAAALMFLFALLSLLAPSPNETNHMHRPRQRSSFDVQSEDNAIGDNVFRVPLNRGLWSFNNSVNFYGCSNASSEFPKAQAITHPDRYLVIATSGGLNQQRTGITDAVVAARILNSTLVVPKLDQRSFWKDSSNFSEIFDVEWFISFLSKDVKIIKELPAKVIQLSKYDYRLANRLDPEYQKLRCRVNYHGLRFTDPILAMGRKLVRRMRMRSKHYIALHLRLSSMITNKAQLLQALAIFLDDCTGLTLPPSGAFPRFEPDMLAFSGCDYGGGEKERKNWGANPDKQRRQGKCPLTPEEVGLMLRALGYGSGVHIYVASGEIYGGENTLAPLRALFPNIHSKETIAIKEELEPFSSFSSRMAALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKNLYQLIMNRNNMTWEAFASRVRTFQKGFMGEPNEVRPGRGVFHENPSTCICEDSVPKVGQDSGHRKHGKDNAINENDDDEDYDDSGLPEMEDDDYENDEDLSDRVEKGTYNGTVSDYDAMNSQNPS* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0256 553 PANTHER O-FUCOSYLTRANSFERASE 16 5 183 - -
Amo08g0256 553 PANTHER O-FUCOSYLTRANSFERASE 16 279 550 - -
Amo08g0256 553 PANTHER O-FUCOSYLTRANSFERASE 16 183 246 - -
Amo08g0256 553 PIRSF UCP009360 2 184 IPR024709 -
Amo08g0256 553 PIRSF UCP009360 278 484 IPR024709 -
Amo08g0256 553 PIRSF UCP009360 182 253 IPR024709 -
Amo08g0256 553 MobiDBLite consensus disorder prediction 502 527 - -
Amo08g0256 553 Pfam GDP-fucose protein O-fucosyltransferase 110 247 IPR019378 -
Amo08g0256 553 Pfam GDP-fucose protein O-fucosyltransferase 278 415 IPR019378 -
Amo08g0256 553 MobiDBLite consensus disorder prediction 480 553 - -
Amo08g0256 553 MobiDBLite consensus disorder prediction 485 501 - -
Amo08g0256 553 CDD O-FucT_plant 110 421 IPR024709 -
Amo08g0256 553 PANTHER O-FUCOSYLTRANSFERASE 16 5 183 - -
Amo08g0256 553 PANTHER O-FUCOSYLTRANSFERASE 16 279 550 - -
Amo08g0256 553 PANTHER O-FUCOSYLTRANSFERASE 16 183 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0256 Amo-Chr8 4557909 4562618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0256 79 479 Miscellaneous Gene Families AT1G22460 38.972 7.09e-88 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0256 - - gmx:100787624 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0256 08 4557909 4562618 Amo17g2033 17 103847788 103853052 hybridization