Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1499 ATGGTTTCAGGAATACGCTTCATACGCATAAATAATAACAACCCTTTCTCTGTGAAGGGTCGAGTTTATTGTGACCCTTGCCGTTTTAGTTTTGAGAGCCTTGCCACCACATACATTGCTGGTGCGGAGGTTATTTTACAATGCAAGGACAGGATCACAAATGACATTGTTTTCAGCAAACAAAGCCAAACTGATTCATCAGGAGCATATACAATAAATGTCGACGCAGATTTTGAAAACCAAGTTTGTGATGTGAAGCTTTTAAGCAGTTCACAAGATGATTGCAAAGAACCTGCGTTAGGTCGTGACCAATCTCGTGTCATACTCAACCGTTTCAATGGCATTGCCACCAATGATAGGTTTGTTAACAACTTGGGTTTCATGAAGAATGAAGCTTTGTCGGGTTGTGCCGATATTCTAAGGAAGTACTACAAATTCGGTTCTAAGAATTAG 453 0.4018 MVSGIRFIRINNNNPFSVKGRVYCDPCRFSFESLATTYIAGAEVILQCKDRITNDIVFSKQSQTDSSGAYTINVDADFENQVCDVKLLSSSQDDCKEPALGRDQSRVILNRFNGIATNDRFVNNLGFMKNEALSGCADILRKYYKFGSKN* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1499 150 Pfam Pollen protein Ole e 1 like 18 99 - -
Amo17g1499 150 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 11 146 IPR006041 -
Amo17g1499 150 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 11 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1499 Amo-Chr17 53939755 53941041 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1499 - - aip:107607324 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1499 17 53939755 53941041 Amo17g1499 17 53939755 53941041 ECH
Amo08g0772 08 13688914 13690188 Amo17g1499 17 53939755 53941041 hybridization
Amo17g1499 17 53939755 53941041 Amo08g0772 08 13688914 13690188 PCT
Amo17g1499 17 53939755 53941041 Amo17g1499 17 53939755 53941041 PCT
Amo08g0772 08 13688914 13690188 Amo17g1499 17 53939755 53941041 PCT