Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0772 ATGGTTGCAGCCATCCGCCCAGCAAAGAACCCCTTCTGCGTGCAGGGCCGTGTGTACTGTGACCCTTGCCGTGCTGGTTTTGAGACCTCTGCCACCACCTACATTGCTGGTAAACCCTATTTCTTAGCTTCAGACCACGCCGACSAAATCTGTGACGCCAAGCTRGTGAGCAGCCCTCACCACCGATGCAAGGTGGTGACCCCYGGGCGRGAACAGGCACGTGTTGCCCTTACACGCCAAAACGGCATTGCCTCCGACACCAGGTTCGCCAATGCCATGGGATTCATGACCGAAGATGTTGCTGCTGGTTGTGCCGAGATCCTCAAGCAATACCAGGAGTTTGATAATGAGAATTAA 357 0.5434 MVAAIRPAKNPFCVQGRVYCDPCRAGFETSATTYIAGKPYFLASDHADXICDAKLVSSPHHRCKVVTPGREQARVALTRQNGIASDTRFANAMGFMTEDVAAGCAEILKQYQEFDNEN* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0772 118 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 1 37 IPR006041 -
Amo08g0772 118 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 42 117 IPR006041 -
Amo08g0772 118 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 1 37 - -
Amo08g0772 118 ProSitePatterns Pollen proteins Ole e I family signature. 15 24 IPR006040 GO:0005615
Amo08g0772 118 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 42 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0772 Amo-Chr8 13688914 13690188 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0772 - - gmx:100305566 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0772 08 13688914 13690188 Amo17g1499 17 53939755 53941041 hybridization
Amo17g1499 17 53939755 53941041 Amo08g0772 08 13688914 13690188 PCT
Amo08g0772 08 13688914 13690188 Amo17g1499 17 53939755 53941041 PCT