Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1242 ATGATACGCAACATTGCAAATCTTGTACCTCTAATGAAGAATGGACCATCAGAGTGTAATGCTGCTCTTGAGTTTGCAGTTACTACTCTAGAGGTAGAGAATATATTAGTCATTGGTCATAGTAGCTGTGCAGGAATTGAAAACCTGATGAAAATTCAAGAAGATGTAGAATCAAGCTTCATAAACAAGTGGGTGACCAATGGGAATGTTGCAAAATTGAGGACAAAAGCAGCCACAGCTCATCTTAGCTTCGCTCAGCAATGCAGATTCTGTGAGAAGGAATCTATAAACCAGTCGTTGTTGAACATGCTCAGTTATCCATGGATAGAAGATAAAGTGAGAAGTGGGTTACTTTCTCTTCATGGAGGGTACTATAATTTCTCGAGTTGCACGTTTGAGAAGTGGACCCTTGATTTTAATGGATGCACTGTCAATGAAGAAAGCAGTAGTTATGCTATCAAAGAACAAGAATTCTGGTCCTGA 483 0.3934 MIRNIANLVPLMKNGPSECNAALEFAVTTLEVENILVIGHSSCAGIENLMKIQEDVESSFINKWVTNGNVAKLRTKAATAHLSFAQQCRFCEKESINQSLLNMLSYPWIEDKVRSGLLSLHGGYYNFSSCTFEKWTLDFNGCTVNEESSSYAIKEQEFWS* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1242 160 SMART Pro_CA_2 1 136 IPR001765 GO:0004089|GO:0008270
Amo17g1242 160 Pfam Carbonic anhydrase 2 129 IPR001765 GO:0004089|GO:0008270
Amo17g1242 160 PANTHER CARBONIC ANHYDRASE 1 160 - -
Amo17g1242 160 Gene3D Carbonic anhydrase 1 145 IPR036874 GO:0004089|GO:0008270
Amo17g1242 160 SUPERFAMILY beta-carbonic anhydrase, cab 2 144 IPR036874 GO:0004089|GO:0008270
Amo17g1242 160 PANTHER CARBONIC ANHYDRASE 1 160 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1242 Amo-Chr17 36540008 36542395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1242 K01673 - gmx:100812124 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1242 17 36540008 36542395 Amo17g1242 17 36540008 36542395 ECH
Amo17g1242 17 36540008 36542395 Amo07g1840 07 55053616 55058389 hybridization