Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1840 ATGGCGTGGTCAATTAGGTCCAGAGTTAGTTCATTTCTCGGATCAGAAGTAGGTGTTATGGGTTCATTATTCCATTGGGACACTTGTTGGAGGACAGTACCCTTTTCTGTTCCAACCAATTCCTCTTCTGCGGTTTCCTCAAGAACAAGGCCATGGCCAAAATTTATGAATTGGGCAAGAATGGATTCTTGCTATGCAGCAGCATCGTTCAAGGAGAAACAATCAGAAAACAAGGATACTGATGTGTGGAATATGGCTGAAGCTGGTGGTGAGCATGCGTTATTTGGGTTGATGAAACAAAGGTTTCTGAGTTTCAAGAACCACAAATACATGAAAGAGTTGGAGCATTTCCAAGCATTGTCTAAAGCTCAATATCCAAAGTTTATGGTGATTGCTTGTGCAGACTCTAGGGTATGTCCTTCAAATATATTAGGATTCCAACCTGGAGAAGCCTTTATGATACGCAACATTGCTAATCTTGTACCTCTAATGAAGAATGGACCATCAGAGTGTAATGCTGCTCTTGAGTTTGCAGTTACTACTCTAGAGGTAGAGAATATATTAGTCATTGGTCATAGTAGCTGTGCAGGAATTGAAAACCTGATGAAAATTCAAGAAGATGTAGAATCAAGAAGCTTCATAAACAAGTGGGTGACCAATGGGAATGTTGCAAAATTGAGGACAAAAGCAGCCACAGCTCATCTTAGCTTCGCTCAGCAATGCAGATTCTGTGAGAAGGTATCCATCATAATTATTTTCTTGTTGAACATGCTCAGTTATCCATGGATAGAAGATAAAGTGAGAAGTGGGTTACTTTCTCTTCATGGAGGGTACTATAATTTCTCGAGTTGCACGTTTGAGAAGTGGACCCTTGATTTTAATGGATGCACTGTCAATGAAGAAAGCAGTAGTTATGTTATCAAAGAACAAGAATTCTGGTCCTGA 945 0.4 MAWSIRSRVSSFLGSEVGVMGSLFHWDTCWRTVPFSVPTNSSSAVSSRTRPWPKFMNWARMDSCYAAASFKEKQSENKDTDVWNMAEAGGEHALFGLMKQRFLSFKNHKYMKELEHFQALSKAQYPKFMVIACADSRVCPSNILGFQPGEAFMIRNIANLVPLMKNGPSECNAALEFAVTTLEVENILVIGHSSCAGIENLMKIQEDVESRSFINKWVTNGNVAKLRTKAATAHLSFAQQCRFCEKVSIIIIFLLNMLSYPWIEDKVRSGLLSLHGGYYNFSSCTFEKWTLDFNGCTVNEESSSYVIKEQEFWS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1840 314 SUPERFAMILY beta-carbonic anhydrase, cab 94 297 IPR036874 GO:0004089|GO:0008270
Amo07g1840 314 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 133 140 IPR015892 GO:0004089|GO:0008270|GO:0015976
Amo07g1840 314 Pfam Carbonic anhydrase 129 283 IPR001765 GO:0004089|GO:0008270
Amo07g1840 314 SMART Pro_CA_2 121 290 IPR001765 GO:0004089|GO:0008270
Amo07g1840 314 PANTHER CARBONIC ANHYDRASE 34 314 - -
Amo07g1840 314 Gene3D Carbonic anhydrase 90 299 IPR036874 GO:0004089|GO:0008270
Amo07g1840 314 PANTHER CARBONIC ANHYDRASE 34 314 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1840 Amo-Chr7 55053616 55058389 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1840 K01673 - gmx:100812124 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1242 17 36540008 36542395 Amo07g1840 07 55053616 55058389 hybridization