Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0628 ATGGACCAACTAAAACCAAACTCTGCAAACTCTTCCCCTCTCACCCCTTTAACATTCTTGGACAGAGCGGGTATAACTTACGGCGATTCCACGTCCGTAATTTACGGTCGCAAATCCTACACATGGACGCAGACCAACCGCCGATGTCTCCAGCTGGCATCATCCCTCTCATCCATCGGCATCGGGAGAGGACACGTGGTCTCCGTCCTCTCCTCCAACAACCTCGCCACCTACGAGCTCCACTTCGCCGTTCCAATGTCCGGCGCCACCCTCAACAACCTTAACCTCCGTCTCGACCACCGCACCCTGTCCCTACTCCTGCGCCACAGCGAATCAAAGCTCCTCTTCGTTCATACACTCTCCCAATCCCTCATCCACAAAGCACTCTCTTTGTTCCCTCCAAACACTCCACTCCCGAAGCTCGTTCTTATCACGGACGATACGGTCGCGTCGCATCAAATGAAAACCCCTCTAACAAACCATGTAACTGTAACTGAAACTGAAAGTGAGGCCAAAACTGTAACTACGCTCGATTTCATAGACACCTACGAGGGGCTTATTGCGAAGGGAGATCCAACGTTTAAATGGGCCAGGCCCAACTCCGAGTGGGACCCAATAACACTGAACTACACATCAGGAACGACGTCGTCTCCGAAAGGCGTTGTGCACTGTCACAGAGGAACGTTCATTATGGCGCTGGATACGTTAGTCGATTGGTGTGTTCCAAAGAATGCAGTGTATCTCTGGACGCTACCAATGTTCCACTCTAACGGTTGGAGCTTCCCGTGGGGTATCGCCGCCGTGGGAGGAACCAACGTTTGCTCGCGTAAGATTGACGCGCCGACGATCTATCGTTTGATCGAGTTGCATGGCGTTACGCACATGTGTGCTGCGCCTGTGGTTCTCAACATGTTGACGAGCTTTGGGAGAACTGAACCGTTGAGGAAACAGGTTCATGTGCTCACCGGTGGTTCTCCCCCGCCGGCGGGGATACTGAAGAGGGCGGAGAGAATGGGGTTTGTGGTGAGCCATGGGTACGGGATGACGGAGACGTGCGGGGTGGTATTGTCGTGTGCGTGGAAGAGGGAATGGGATTTGTTTTCGGCGGCAGAGAGAGCGAGGATGAAGGCAAGGCAAGGAGTGAGGACGGCGGCGGCAACGGCGGAGGTGGACGTTGTGGATCTCAAGTGGGGAGTTAGTGTCAAGCGCGACGGGTTGACGCAGGGCGAGATCGTGGTCAGAGGAGCTTGTGTAATGTTAGGTTACTTCAAAGACCAGGAAGCCACATCAAAGTGCATAAAGAACGGATGGTTACACACTGGGGACGTTGCGGTGGTTCACGAGGATGGATACATAGAGATTAAGGATAGGTTAAAGGATGTGATTATAAGTGGTGGCGAGAATTTGAGCAGCGTGGAGGTGGAAGCTATGCTTTACACACACCCGGCTGTGAGCGATGTTGCCGTGGTGGCCAGGCCAGACGAGTTCTGGGGTGAGACGCCGTGTGCTTTCGTGAAGCTGAAAGGACGGTTGGAGAGGCGTCCGTCGGAGGAGGAGATGGTGGAGTTCTGTAGGGAGAGGTTGCCGCACTTCATGGTGCCTAAAACGGTCGTTTTCAGGGATGAACTGCCGAGAACTTCCACCGGGAAGGTTCAAAAGTATGTGCTGAGAATGGTTGCTCGGGCTATGGGGTCGCTACCATTGCCATCGCCATCGCCGCCTCCACCGCCAATTATAACGCCGAGTAGTCGTATGTGA 1758 0.5398 MDQLKPNSANSSPLTPLTFLDRAGITYGDSTSVIYGRKSYTWTQTNRRCLQLASSLSSIGIGRGHVVSVLSSNNLATYELHFAVPMSGATLNNLNLRLDHRTLSLLLRHSESKLLFVHTLSQSLIHKALSLFPPNTPLPKLVLITDDTVASHQMKTPLTNHVTVTETESEAKTVTTLDFIDTYEGLIAKGDPTFKWARPNSEWDPITLNYTSGTTSSPKGVVHCHRGTFIMALDTLVDWCVPKNAVYLWTLPMFHSNGWSFPWGIAAVGGTNVCSRKIDAPTIYRLIELHGVTHMCAAPVVLNMLTSFGRTEPLRKQVHVLTGGSPPPAGILKRAERMGFVVSHGYGMTETCGVVLSCAWKREWDLFSAAERARMKARQGVRTAAATAEVDVVDLKWGVSVKRDGLTQGEIVVRGACVMLGYFKDQEATSKCIKNGWLHTGDVAVVHEDGYIEIKDRLKDVIISGGENLSSVEVEAMLYTHPAVSDVAVVARPDEFWGETPCAFVKLKGRLERRPSEEEMVEFCRERLPHFMVPKTVVFRDELPRTSTGKVQKYVLRMVARAMGSLPLPSPSPPPPPIITPSSRM* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0628 585 Gene3D - 459 563 IPR045851 -
Amo17g0628 585 PANTHER ACYL-ACTIVATING ENZYME 2 566 - -
Amo17g0628 585 CDD ttLC_FACS_AEE21_like 12 557 - -
Amo17g0628 585 PANTHER LONG-CHAIN ACYL-COA SYNTHETASE 2 566 - -
Amo17g0628 585 Pfam AMP-binding enzyme 26 464 IPR000873 -
Amo17g0628 585 MobiDBLite consensus disorder prediction 567 585 - -
Amo17g0628 585 ProSitePatterns Putative AMP-binding domain signature. 208 219 IPR020845 -
Amo17g0628 585 Pfam AMP-binding enzyme C-terminal domain 473 550 IPR025110 -
Amo17g0628 585 Gene3D - 2 458 IPR042099 -
Amo17g0628 585 MobiDBLite consensus disorder prediction 565 585 - -
Amo17g0628 585 SUPERFAMILY Acetyl-CoA synthetase-like 12 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0628 Amo-Chr17 13485586 13488843 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0628 1 563 EF-hand Containing Proteins AT1G21540 55.009 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0628 - - ahf:112702625 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0628 17 13485586 13488843 Amo17g0628 17 13485586 13488843 ECH
Amo17g0628 17 13485586 13488843 Amo07g0924 07 16963212 16966800 hybridization