Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0924 ATGGACCAACTAAAACCAAACTCTGCAAACTCTTCCCCTCTCACCCCATTAACATTCTTGGACAGAGCGGGGATAACTTACGGCGATTCCACGTCCGTAATTTACGGTCGCAAATCCTACACGTGGACGCAGACCAACCGCCGATGCCTCCAGCTGGCATCATCCCTCTCATCCATCGGCATTGGAAGAGGACACGTGGTCTCCGTCCTCTCCTCCAACAACCTCGCCACCTACGAGCTCCACTTCGCCGTTCCAATGTCCGGCGCCACCCTCAACAACCTTAACCTCCGTCTCGACCACCGCACCCTGTCCCTACTCCTGCGCCACAGCGAATCAAAGCTCCTCTTCGTTCATACACTCTCCCAATCCCTCATCCACAAAGCACTCTCTTTGTTCCCTCCAAACACTCCACTCCCGAAGCTCGTCCTTATCACGGACGATACGGTCGCGTCGCATCAAATGAAAACCCCTCTAACAAACCATGTAACTGTAACTGAAACTGAAACTGAAACTGAGGCCAAAACTGTAACTACTCTCGATTTCATAGACACCTACGAGGGGCTCATTGCGAAGGGAGATCCAACGTTTAAATGGGTCAAGCCCAACTCCGAGTGGGACCCCATAACACTGAACTACACATCAGGAACGACGTCGTCTCCGAAAGGCGTTGTGCATTGTCACAGAGGAACGTTCATTATGGCGCTGGATACGTTAGTCGATTGGTGTGTTCCAAAGAATGCAGTGTATCTCTGGACGCTACCAATGTTCCACTCTAACGGTTGGAGCTTCCCGTGGGGCATCGCCGCCGTGGGAGGAACCAACGTTTGCTCGCGTAAGATTGACGCGCCGACGATCTATCGTTTGATCGAGTCGCATGGCGTTACGCACATGTGTGCTGCGCCAGTGGTTCTCAACATGTTGACGAGCTTTGGGAGAACTGAACCGTTGAGGAAACAGGTTCATGTGCTCACCGGTGGTTCTCCGCCGCCGGCGGGGATACTGAAGAGGGCGGAGAGAATGGGGTTTGTGGTGAGCCACGGGTACGGGATGACGGAGACTTGCGGGGTGGTATTGTCGTGTGCGTGGAAGAGGGAATGGGATTTGTTTTCGGCGGCAGAGAGAGCGAGGATGAAGGCAAGGCAAGGAGTGAGGACGGCGGCGGCAACGGCGGAGGTGGACGTCGTGGATCTCAAGTGGGGAGTTAGTGTCAAGCGCGACGGGTTGACGCAGGGCGAGATCGTGGTCAGAGGAGCTTGTGTAATGTTAGGTTACTTCAAAGACGAAGAAGCCACATCAAAGTGCATAAAGAATGGATGGTTACATACTGGGGACGTTGCGGTGGTTCACGAGGATGGATACATAGAGATTAAGGATAGGTTAAAGGATGTGATTATAAGTGGTGGCGAGAATTTGAGCAGCGTGGAGGTAGAAGCTATGCTTTACACACACCCGGCTGTGAGCGATGTTGCCGTGGTGGCCAGGCCAGACGAGTTCTGGGGTGAGACGCCGTGTGCTTTCGTGAAGCTGAAAGGACGGTTGGAGAGGCGTCCGTCGGAGGAGGAGATGGTGGAGTTCTGTAGGGAGAGGTTGCCCCACTTCATGGTGCCTAAAACGGTCGTTTTCAGGGATGAGCTGCCGAGAACCTCCACCGGGAAGGTTCAAAAGTATGTGCTGAGAATGGTTGCTCGGGCTATGGGGTCGCTACCGTTGCCGTTGCCATCGCCATCGCCATCGCCGCCTCCACCACCAATTATAACGCCGAGTAGTCGTATGTGA 1776 0.5405 MDQLKPNSANSSPLTPLTFLDRAGITYGDSTSVIYGRKSYTWTQTNRRCLQLASSLSSIGIGRGHVVSVLSSNNLATYELHFAVPMSGATLNNLNLRLDHRTLSLLLRHSESKLLFVHTLSQSLIHKALSLFPPNTPLPKLVLITDDTVASHQMKTPLTNHVTVTETETETEAKTVTTLDFIDTYEGLIAKGDPTFKWVKPNSEWDPITLNYTSGTTSSPKGVVHCHRGTFIMALDTLVDWCVPKNAVYLWTLPMFHSNGWSFPWGIAAVGGTNVCSRKIDAPTIYRLIESHGVTHMCAAPVVLNMLTSFGRTEPLRKQVHVLTGGSPPPAGILKRAERMGFVVSHGYGMTETCGVVLSCAWKREWDLFSAAERARMKARQGVRTAAATAEVDVVDLKWGVSVKRDGLTQGEIVVRGACVMLGYFKDEEATSKCIKNGWLHTGDVAVVHEDGYIEIKDRLKDVIISGGENLSSVEVEAMLYTHPAVSDVAVVARPDEFWGETPCAFVKLKGRLERRPSEEEMVEFCRERLPHFMVPKTVVFRDELPRTSTGKVQKYVLRMVARAMGSLPLPLPSPSPSPPPPPIITPSSRM* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0924 591 Gene3D - 461 565 IPR045851 -
Amo07g0924 591 CDD ttLC_FACS_AEE21_like 12 559 - -
Amo07g0924 591 MobiDBLite consensus disorder prediction 569 591 - -
Amo07g0924 591 SUPERFAMILY Acetyl-CoA synthetase-like 12 562 - -
Amo07g0924 591 PANTHER LONG-CHAIN ACYL-COA SYNTHETASE 2 568 - -
Amo07g0924 591 MobiDBLite consensus disorder prediction 570 591 - -
Amo07g0924 591 PANTHER ACYL-ACTIVATING ENZYME 2 568 - -
Amo07g0924 591 ProSitePatterns Putative AMP-binding domain signature. 210 221 IPR020845 -
Amo07g0924 591 Pfam AMP-binding enzyme C-terminal domain 475 552 IPR025110 -
Amo07g0924 591 Pfam AMP-binding enzyme 26 466 IPR000873 -
Amo07g0924 591 Gene3D - 2 460 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0924 Amo-Chr7 16963212 16966800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0924 1 565 EF-hand Containing Proteins AT1G21540 54.641 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0924 - - ahf:112702625 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0628 17 13485586 13488843 Amo07g0924 07 16963212 16966800 hybridization