Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0291 ATGGGTTTTTCAAAAGAAGAGAAATCAAAGAGGGTATTGAGGGTTGTGAAGACACTTTTCTTTTTAATCACAATGATTATGTCATTGCTTCTCATCTCTGCTCCCACCATTCTTGTTATTGGCGATGCTCTGCTTCCCTCTGCTCTTCTCTCTGTTTTTTCTTCTTCATCATTGTTGTCGCCGCCATCATCTATCAAAACAACTCTGTTTTCTCATCTTCAGAATTACGATTTTCGATACTCCCTCGTCGATATCCCCCTCCTATCCATCGCTCGATCTCTCGTTATATTCTGTGTTTATAGCTTATGTGATGGGCCAAGGCTTTCAAATGGTCCATATTTGGGTGTAACAACGGTGTGTTCGGTGTTTTCTTTGATGTTTGTGTCATTGAAAGCTGTTTACATATTTGGGAGTGGAACAACAGCAGCAACAAAAGAGTATTATTATGTTAGAAGCTCCGAAATAGCTTTATTTGTGTGTTCTTATGTTTTTGCTGTGGGGCATGTTGTTGTTGCATACAGAACAAGTTGCAGAGAGAGAAGGAAGCTTTTGGTCTACAAAATTGACATTGAAGCTATTTCAGCTTGTAAAAATGGGTATTCTCGGTATCCAAAGAAGATTCTTGTAGAAGAGAGAGTCAAATGA 645 0.3891 MGFSKEEKSKRVLRVVKTLFFLITMIMSLLLISAPTILVIGDALLPSALLSVFSSSSLLSPPSSIKTTLFSHLQNYDFRYSLVDIPLLSIARSLVIFCVYSLCDGPRLSNGPYLGVTTVCSVFSLMFVSLKAVYIFGSGTTAATKEYYYVRSSEIALFVCSYVFAVGHVVVAYRTSCRERRKLLVYKIDIEAISACKNGYSRYPKKILVEERVK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0291 214 Pfam Cholesterol-capturing domain 63 137 IPR019498 -
Amo17g0291 214 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 212 - -
Amo17g0291 214 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0291 Amo-Chr17 4761853 4765036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0291 2 205 Miscellaneous Gene Families AT1G80280 41.395 7.04e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0291 - - gmx:100811069 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0291 17 4761853 4765036 Amo17g0291 17 4761853 4765036 ECH
Amo17g0291 17 4761853 4765036 Amo07g0503 07 5691384 5694871 hybridization
Amo10g1064 10 21047516 21050907 Amo17g0291 17 4761853 4765036 PCT
Amo17g0291 17 4761853 4765036 Amo10g1064 10 21047516 21050907 PCT