Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0503 ATGGGTTTTTCAAAAGAAGAGAAATCAAAGAGGGTATTGAGGGTTGTGAAGACACTTTTCTTTTTAATCACAATGATTATGTCATTGCTTCTCATCTCTGCTCCCACCATTCTTGTTATTGGCGATGCTCTGCTTCCCTCTGCTCTTCTCTCTGTTTTTTCTTCTTCATCATTGTTGTCGCCGCCATCATCTATCAAAACAACTCTGTTTTCTCATCTTCAGAATTACGATTTTCGATACTCCCTCGTCGATATCCCCCTCCTATCCATCGCTCGATCTCTCGTTATATTCTGTGTTTATAGCTTATGTGATGGGCCAAGGCTTTCAAATGGTCCATATTTGGGTGTAACAACGGTGTGTTCGGTGTTTTCTTTGATGTTTGTGTCATTGAAAGCTGTTTACATATTTGGGAGTGGAACAACAGCAGCAACAAAAGAGTATTATTATGTTAGAAGCTCCGAAATAGCTTTATTTGTGTGCTCTTATGTTTTTGCTGTGGGGCATGTTGTTGTTGCATACAGAACAAGTTGCAGAGAGAGAAGGAAGCTTTTGGTCTACAAAATTGACATTGAAGCTATTTCAGCTTGTAAAAATGGGTATTCTCGGTATCCAAAGAAGATTCTTGTAGAAGAGAGAGTCAAATGA 645 0.3907 MGFSKEEKSKRVLRVVKTLFFLITMIMSLLLISAPTILVIGDALLPSALLSVFSSSSLLSPPSSIKTTLFSHLQNYDFRYSLVDIPLLSIARSLVIFCVYSLCDGPRLSNGPYLGVTTVCSVFSLMFVSLKAVYIFGSGTTAATKEYYYVRSSEIALFVCSYVFAVGHVVVAYRTSCRERRKLLVYKIDIEAISACKNGYSRYPKKILVEERVK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0503 214 Pfam Cholesterol-capturing domain 63 137 IPR019498 -
Amo07g0503 214 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 212 - -
Amo07g0503 214 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0503 Amo-Chr7 5691384 5694871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0503 2 205 Miscellaneous Gene Families AT1G80280 41.395 7.04e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0503 - - gmx:100811069 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0291 17 4761853 4765036 Amo07g0503 07 5691384 5694871 hybridization
Amo10g1064 10 21047516 21050907 Amo07g0503 07 5691384 5694871 PCT
Amo07g0503 07 5691384 5694871 Amo10g1064 10 21047516 21050907 PCT