Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0201 GTATATCCACTACTCTTTCCTTTCACAATAACACTATACAACACAAATATCAACAACAATAACATGGAGTCAGTTCAGTCCTGGGTTTCAGAGCACAAGCTCACTACAGTTGGGGGGCTATGGGCCTCAGGAATAGGAGCATCACTGATTGCTTATTCAAGAGCAAGGTCTCCAATGAAACCAAGTCTTAGGCTTATACATGCCAGGATGCATGCACAGGCATTAACACTAGCAGTGTTGTCGGGTGCTGCAGCTTATCACTACTATGAGAAACGAAGCAGTGACATTGCCATGGCTAATAATAATGAACCAAATATCACAAAATCACTTATGGAAGAAAATACTACAACTTCATCAAGTGTGTCACACCAATGGGAGCTCCTTAGTCCTTTCTAA 396 0.4167 VYPLLFPFTITLYNTNINNNNMESVQSWVSEHKLTTVGGLWASGIGASLIAYSRARSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYEKRSSDIAMANNNEPNITKSLMEENTTTSSSVSHQWELLSPF* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0201 131 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 24 111 IPR040153 -
Amo17g0201 131 Pfam Hypoxia induced protein conserved region 31 82 IPR007667 -
Amo17g0201 131 Gene3D - 36 94 - -
Amo17g0201 131 ProSiteProfiles HIG1 domain profile. 6 98 IPR007667 -
Amo17g0201 131 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 24 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0201 Amo-Chr17 2928858 2929532 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0201 - - aip:107608949 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1263 20 26452518 26453112 Amo17g0201 17 2928858 2929532 PCT
Amo10g0837 10 13358646 13359212 Amo17g0201 17 2928858 2929532 PCT
Amo17g0201 17 2928858 2929532 Amo20g1263 20 26452518 26453112 PCT
Amo17g0201 17 2928858 2929532 Amo10g0837 10 13358646 13359212 PCT