Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4065 ATGGTGCGGATTATTCCCTTGCCCACCAACACTATCACCGGAAAGCCTTCACCTTTAGAAACTTTTGTGGCCATACTCGTTCTCTGCATTCTGGGTTTCTACACCCTCTATTACCCTTACCCTGTTTCAACTTCAACCGCCATTGATCTCTTTCTCTCTTCTGCTTCCAACTCCACCATCTCCTCCTACCTTCGCAGCCTCACCCTCCACCCTCACCTCGCCGGAACAAAGCTCGCCGCCGATACCACTCGCCTCGTCATAAACCACTTCAGGTCCCTTAACCTTCCAACCCACACAACAACCTACACCACACTCCTCTCTTACCCTCTTCACTCCTCTGTTTCATTGCATTTCCCAAACGGTTCAGTTCTCAACCTTCCGCTCACCGAACCCGTTCATTTCAGCGACCAGACCGGACAACCAGTAGTGCAACCTTACCACGCTTACTCGCCGTCCGGTTCGGCTTATGCGAGGGCGGTTTTCGTGAACTACGGCAGGGAGAGGGACTACCGTGCGCTTCGGGCGCAGGGGGTGCACGTTAACGGCTGCGTCGTTGTGGTTCGTAAAGGCGACGGGTTAGGGAGGGGAGCGGTGGTTGAGAAAGCTGAAGAGAATGGCGCGGTGGCAGTTCTGGTTTACGGGGACGGTGAYACGTGGCGTGATGGGTTCGAGAGAGGTCACGTGATGAGGGGTGTGGGGGACCCTTTGAGTCCTGGTTGGGCTGGTGTTGATGGCGGTGAAACCTTGGGTTTGGATGATAGTGAGGTTTCGAAGAGGTTCCCCAAAATTCCATCTTTACCCTTGTCTGCTGAGGTTGCTGAGAYTGTTTTGGGWTCCTTGGGTGGTGCKCCGGTGCCCCTTGAATGGAGGGGTACCCTAGGATCTAAGGTCAGGCACGTTGGTCCTGGTCCCACCATGCTCAATTTCTCTTACCAGGGAGAGAAGAAAGTGGCAACTATTCAGAATGTGTTTGCTGTGATAAAAGGTTGTGAGGAACCTGATAGGTATGTGTTGCTTGGGAACCATAGAGATGCATGGACTTTTGGTGCTGTTGATCCCAGCAGTGGGACAGCTGCCCTGCTCGACATTGCCCGGAGATTTTCGATTCTGTTAGGTTCCGGTTGGACTCCGAGGAGATCTATCATTCTCTGCAGCTGGGATGCTGAGGAATTCGGAATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTATCAATCTGAGTCCCAAAGCTGTGGCATACCTTAATGTGGACTGTGCTGTTCAAGGGCCTGGCCTCTTTGTTGGCTCAACTCCTCAGCTAGACAATCTTATCGTGGAGGTCACAAAGAAGGTCAAGGATCCTGATTCTGAGGGTGCATCAATATATGAGAACTGGGCTGTCACTGGTGAAGACTACAATATTCAAAGGCTCAGTGCAGTTGATTCTGATTTTGCTCCATTTGTGCAACATGCAGGGGTTCCATCTATTGATGTTTATTATGGAAGAGATTTTCCTGTCTATCACACGGCTTACGACTCGTATAACTGGATGACAGAGTATGGAGATCCATTTTTTCAGCGACATGTTGCCGTTACTGGAATTTGGGGACTCCTGGCCCTTCACCTGGCCGACGATTCCATTCTTCCCTTCAATTACATTTCCTATGCGAATCAATTATTGTTTTACAAGAACAAGTTGAGCAACTTGTTAGATCAGCAAGTTTCTCTACATCCATTAACCATGTCAATTCAAGAATTTGCTTCTGCTGCCAAGCAAGTTGATGATGAATCAAAGCAACTGAGATTGCAAGAAACTGCAGGTGATATAGTAGATATGAGGAAGCGAGCGTTGAACGATAGACTAATCCTTGCCGAAAAAGGCTTCATTGATGCAGATGGTCTTCATGGAAGAAAGTGGTTCAAGCATCTTGTATTTGGGCCTCCAAGGGACCAAGAAAGCAAGCTAGATTTCTTCCCTGGGATTGCTGATTCAATAACACAGGGATCATCAAAGGCAACAAGTGAAAGAGAAAGGGTAGCAGCAATTCAACATGAAATCTGGAGAGTTGCAAGAGCCATTCAAACAGCTGCTTCTGCACTCAAAGGAGAATTCACCTAA 2100 0.4871 MVRIIPLPTNTITGKPSPLETFVAILVLCILGFYTLYYPYPVSTSTAIDLFLSSASNSTISSYLRSLTLHPHLAGTKLAADTTRLVINHFRSLNLPTHTTTYTTLLSYPLHSSVSLHFPNGSVLNLPLTEPVHFSDQTGQPVVQPYHAYSPSGSAYARAVFVNYGRERDYRALRAQGVHVNGCVVVVRKGDGLGRGAVVEKAEENGAVAVLVYGDGDTWRDGFERGHVMRGVGDPLSPGWAGVDGGETLGLDDSEVSKRFPKIPSLPLSAEVAEXVLGSLGGAPVPLEWRGTLGSKVRHVGPGPTMLNFSYQGEKKVATIQNVFAVIKGCEEPDRYVLLGNHRDAWTFGAVDPSSGTAALLDIARRFSILLGSGWTPRRSIILCSWDAEEFGMIGSTEWVEQNLINLSPKAVAYLNVDCAVQGPGLFVGSTPQLDNLIVEVTKKVKDPDSEGASIYENWAVTGEDYNIQRLSAVDSDFAPFVQHAGVPSIDVYYGRDFPVYHTAYDSYNWMTEYGDPFFQRHVAVTGIWGLLALHLADDSILPFNYISYANQLLFYKNKLSNLLDQQVSLHPLTMSIQEFASAAKQVDDESKQLRLQETAGDIVDMRKRALNDRLILAEKGFIDADGLHGRKWFKHLVFGPPRDQESKLDFFPGIADSITQGSSKATSERERVAAIQHEIWRVARAIQTAASALKGEFT* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4065 699 CDD M28_PSMA_like 318 544 - -
Amo16g4065 699 PANTHER F10A2.10 PROTEIN-RELATED 37 699 - -
Amo16g4065 699 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 37 699 IPR039373 -
Amo16g4065 699 SUPERFAMILY Zn-dependent exopeptidases 56 541 - -
Amo16g4065 699 Pfam Transferrin receptor-like dimerisation domain 568 695 IPR007365 -
Amo16g4065 699 Gene3D Zn peptidases 58 543 - -
Amo16g4065 699 Gene3D - 544 696 IPR036757 -
Amo16g4065 699 SUPERFAMILY PA domain 105 324 IPR046450 -
Amo16g4065 699 Pfam Peptidase family M28 322 509 IPR007484 -
Amo16g4065 699 SUPERFAMILY Transferrin receptor-like dimerisation domain 543 697 IPR036757 -
Amo16g4065 699 Gene3D - 112 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4065 Amo-Chr16 153123386 153127566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4065 K01301 - gmx:100818733 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4065 16 153123386 153127566 Amo16g4065 16 153123386 153127566 ECH
Amo16g4065 16 153123386 153127566 Amo06g0411 06 5527989 5531970 hybridization