Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3644 ATGGATCCAAATAACCTTTCACCTGATGATGGGATAGAAAAGGTCCACCAAAATGGTGCTTTTGAGGAACCTGAAAAACAAGAGAATGGCATCGCTTTGAATGATGTAGACCACAGTGTCACCCAAAATACAGAAGCTGCGTCTCCAACTGAAAATTCCAACCAGCATGATAGCATTACAACTGATGACTCATCTACGAGAGAAAATGAAGAATCTAATGACTACATGAGAGGAAATAATGTTACCAATTCAAAGGAAGAGGAATCGAAAGCCAAAGACCAAACACAGCAATCAAAAGCACGGAAGGCTCCTGTGAAGAATAACAATACCAAAGCACCAAGTTCCAGAGGTGTACATTCTAGTTCGGTGAGAAGGGGAAAAGATGGAAAAGCTGAAGAGACCACATCTGCTGTTTCAAATGGTGCTTCAGCTCGTCCACGACAGCCTGCTAAAACCAGGTCATTTAATGATCGGCAGAATCAATCGTCCAAGCACTCTTCAAAATCCGAAGCAGCATCTTCTGAGATACCAACGGAGAATACAAAAACAAAATCAGTGAAAAAGGGACCCTCTGAGAAAGCTCACGGAGAAACAGAATCTTCAGTCGGTGCAGAAGATGACAAACCACGTAGGGTGGGGACACTTCCGAACTATGGATTCAGTTTCAAGTGTGGTGAGCGAGCTGAGAGAAGAAAAGAGTTTTACACCAAACTTGAGGAAAAGATTCATCAAAAGGAGGTGGAGAAGAATAACATGCAAGCAAAATCCAAGGAGACTCAAGAAGCCGAGATTAAGATGCTTAGGAAGAGTCTAACATTTAAAGCAACTCCAATGCCAAGTTTCTACCAGGAGCCTCCTCCTCCTAAGGTGGAGCTCAAGAAGATACCAACTACAAGAGCAAAATCCCCCAAGCTTGGTCGGAAAAAGGGCTCAATAAATCCAGACTCAGATGGAAATACTAGCAGCAGTTCTCAACAGGGTCGGTTAAGTCTGGACGAGAAGGCATCTCAGGGTAAATTGACTAAAGAAACTGTTCCAGTTGAGCAAAAGAAACCGCCAAGGAAATCTCTTCCTACTCGACTAGCTTCTGAAAGGATACTATCTTCCAATTCAACAGCTGCAACGACTAAATCTAAGGTGGTGAAGGGCGATAAGACCTTGCCTAGTGCAACAAAAAAAGATACCAACTCAACTAGTGCTACAGCCGGAGAGGAGAAAGTTAAGGTGGCTACAAAAAATGAAGAGAATACTACTTCAATCAGTGGGAACATTGAACCTCTACCTCCTAGGGCAGTCCCTTCCGACGATCCAGATGAAGCAGAACTTCAGGTAAATGGTGATACAGAAGTTGAAGAGAACCCTCAGCTCATGCAAAAACCGATCACAGCTGAGCATTAA 1398 0.4335 MDPNNLSPDDGIEKVHQNGAFEEPEKQENGIALNDVDHSVTQNTEAASPTENSNQHDSITTDDSSTRENEESNDYMRGNNVTNSKEEESKAKDQTQQSKARKAPVKNNNTKAPSSRGVHSSSVRRGKDGKAEETTSAVSNGASARPRQPAKTRSFNDRQNQSSKHSSKSEAASSEIPTENTKTKSVKKGPSEKAHGETESSVGAEDDKPRRVGTLPNYGFSFKCGERAERRKEFYTKLEEKIHQKEVEKNNMQAKSKETQEAEIKMLRKSLTFKATPMPSFYQEPPPPKVELKKIPTTRAKSPKLGRKKGSINPDSDGNTSSSSQQGRLSLDEKASQGKLTKETVPVEQKKPPRKSLPTRLASERILSSNSTAATTKSKVVKGDKTLPSATKKDTNSTSATAGEEKVKVATKNEENTTSISGNIEPLPPRAVPSDDPDEAELQVNGDTEVEENPQLMQKPITAEH* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3644 465 MobiDBLite consensus disorder prediction 181 212 - -
Amo16g3644 465 Pfam Targeting protein for Xklp2 (TPX2) domain 220 290 IPR027329 -
Amo16g3644 465 MobiDBLite consensus disorder prediction 268 465 - -
Amo16g3644 465 MobiDBLite consensus disorder prediction 390 404 - -
Amo16g3644 465 MobiDBLite consensus disorder prediction 133 180 - -
Amo16g3644 465 MobiDBLite consensus disorder prediction 34 60 - -
Amo16g3644 465 MobiDBLite consensus disorder prediction 81 99 - -
Amo16g3644 465 Coils Coil 235 262 - -
Amo16g3644 465 MobiDBLite consensus disorder prediction 362 379 - -
Amo16g3644 465 MobiDBLite consensus disorder prediction 313 332 - -
Amo16g3644 465 MobiDBLite consensus disorder prediction 100 120 - -
Amo16g3644 465 PANTHER PROTEIN WVD2-LIKE 4 1 457 IPR044833 GO:0008017
Amo16g3644 465 MobiDBLite consensus disorder prediction 15 32 - -
Amo16g3644 465 MobiDBLite consensus disorder prediction 335 358 - -
Amo16g3644 465 MobiDBLite consensus disorder prediction 1 221 - -
Amo16g3644 465 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3644 Amo-Chr16 147186655 147191560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3644 - - gmx:100786958 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3644 16 147186655 147191560 Amo06g2854 06 94028342 94033176 hybridization
Amo16g3644 16 147186655 147191560 Amo08g2104 08 33888223 33890875 PCT
Amo08g2104 08 33888223 33890875 Amo16g3644 16 147186655 147191560 PCT