Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2104 ATGGTAGACCGCAGTGTTGCTGAAATTACAGAAATGGCATCTCCAAATGGAAATGTTGAAAAGTTTGATGAGTTGGATGGCGCTGCAACTGATAACTCATCTGTGGTGGAAATCAGGGAAGTAGCAAATGGCAGCAGCAATGGCAACAATGTGGACAATTCTAATGATGAGGATGTTACTACAGTAGAGGATCAATCAAGGCAATTAAGAGCTCAAAAGGGTCCTGTGAAGGAAAAGTGCACAAAGCCCACAGGTTTGAAAGGTGTTCATACAAACTCGGTGAAAAGATTCAAAGATGGACAAGATGAACATGCATCATCTGCTGTTTCAAATGGTACTTCAGCTTCAGAACCCCACCCTAGGCAGCCTGCCAAAATCAGATCGTATGATGACAAGGAAACTTGGTTGTCCAAGCACCATGGAAAATCTGATCCAGTGTCTTCTGAAGTACCACTGGACAAAGCTAAACCAAGATCATTGAAGAAAGGGCCTGCTGAAAATGTTCAAGGAGGAACAGAATGTTCTTCTCCTACTGCAGAAGATGCTAAACCTCGTAGGGTTGGGGCACTTCCAAATTATGGATTCAGCTTCAAATGTGATGAGCGAGCTGAGAGAAGAAAACAGTTAAAAGAATCATTGATATTCTGGTGGCCAGTTTACTCAAAGCTCGAGGAAAAGATTCATGCAAAGGAAATGGAGGAGAGTAACCTACAAGCAAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGGAAGAGTCTTGCATTTAAAGCAACTCCAATGCCTAGTTTTTACCAGGAGCCTACTCCTCCTAGGGTAGAGTTAAAGAAGATACCAACTACAAGAGCGAAATCCCCCAAGCTTGGTCGTAGGAAGAGCACCACACATCCAGAGTCAGAAGGAGACGCTATCAGCAGCGCTCAAGTAGGTCGTTTAAGCCTCAATGAGAAAGCGTCTCAGAGTACACCAACTAAAGGAATTTCTCCTGTCAATCAAAAGAAGCCGCAGCGAAAATCTCTTCCTCCTCGACTGGCTTCTGAAAAGAGTAGTCCATCCAATTCATCTACTGTGCGGACTCCATCTAAGATCACAAAAACCTCCTTATCTAGTGTAGCGACTAAAGTTACCACCTTGTCCAATTCAACAGTGAAAGATAAGGTCAAGGTGGCTGAGGCCAATGAAGAAAATAACATCTTTTCCCATGAAACAAGCAAAGTTCCACCTCTGAATGCAGCTCCCAGTCCCATGGACAAGCCAAGTGAAGCCGAGTTGTGCGCAAATGGCAATGTACTCAGAGAAGAGAAACAAGAACAAGAACAAACCTTTGTACACCATAGCAACCGAGAATTAAGTAAGTGGCAGGAGCAGAACTGA 1380 0.437 MVDRSVAEITEMASPNGNVEKFDELDGAATDNSSVVEIREVANGSSNGNNVDNSNDEDVTTVEDQSRQLRAQKGPVKEKCTKPTGLKGVHTNSVKRFKDGQDEHASSAVSNGTSASEPHPRQPAKIRSYDDKETWLSKHHGKSDPVSSEVPLDKAKPRSLKKGPAENVQGGTECSSPTAEDAKPRRVGALPNYGFSFKCDERAERRKQLKESLIFWWPVYSKLEEKIHAKEMEESNLQAKTKETQEAEIKMLRKSLAFKATPMPSFYQEPTPPRVELKKIPTTRAKSPKLGRRKSTTHPESEGDAISSAQVGRLSLNEKASQSTPTKGISPVNQKKPQRKSLPPRLASEKSSPSNSSTVRTPSKITKTSLSSVATKVTTLSNSTVKDKVKVAEANEENNIFSHETSKVPPLNAAPSPMDKPSEAELCANGNVLREEKQEQEQTFVHHSNRELSKWQEQN* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2104 459 Pfam Targeting protein for Xklp2 (TPX2) domain 195 276 IPR027329 -
Amo08g2104 459 PANTHER PROTEIN WVD2-LIKE 5-RELATED 3 440 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 123 161 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 104 118 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 436 454 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 436 459 - -
Amo08g2104 459 Coils Coil 220 250 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 345 372 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 261 372 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 60 77 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 396 424 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 1 187 - -
Amo08g2104 459 MobiDBLite consensus disorder prediction 301 337 - -
Amo08g2104 459 PANTHER PROTEIN WVD2-LIKE 4 3 440 IPR044833 GO:0008017
Amo08g2104 459 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2104 Amo-Chr8 33888223 33890875 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2104 - - gmx:100804879 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3644 16 147186655 147191560 Amo08g2104 08 33888223 33890875 PCT
Amo06g2854 06 94028342 94033176 Amo08g2104 08 33888223 33890875 PCT
Amo08g2104 08 33888223 33890875 Amo16g3644 16 147186655 147191560 PCT
Amo08g2104 08 33888223 33890875 Amo06g2854 06 94028342 94033176 PCT