Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3631 ATGGAGTATTGTGAAAGAGAGCAAGAAGGGAAGCGGTTACACGACCCTATAATAAGTCGGAAGAAGGCGGAGCGATGCGTGTGGGTGCCGGGTCCAGTGATAGTGGGAGCAGGGCCGTCGGGACTAGCAGCAGCAGCGTGTCTGAAGGAAAAAGGCGTGGCAAGCGTGATTCTAGAAAGATCGAATTGCATAGCTTCTTTATGGCAGCTAAACACCTACGACCGACTTCGCCTTCATCTTCCAAAACAATTCTGCWAGCTTCCTCTCATGGGATTCCCCTCTAACTTCCCCACTTACCCTACCAAGCAGCAGTTCATYCGCTATCTTGAATCCTACGCCGAGCACTTCGCCATTCAGCCCAGGTTCAACGAGGCTGTWAAGGAAGCGGAGTTCGATTCCTCCTTGGGGTTCTGGCGAGTGAAGACAACGACGGCGACGGAGTTCGTGTGCCGGTGGGTTATAGTGGCGACAGGGGAGAATGCGGAGGCTGTGGTGCCTGAGATTGAGGGGAWGGGGGAGTTTGGCGGTACTATAAAGCACACAAGCTTGTATAAGAGTGGGGGAGAGTTCAAAGGGAAGAAGGTTTTGGTGGTTGGWTGTGGAAATTCGGGTATGGAAGTTTGTTTGGATCTTTGCAACCATAATGCCACTCCTTCTCTTGTCGTCAGAGATACGGTACACATCCTACCAAGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGCTGCTCAAGTGGCTGCCCATACAACTTGTTGATCGCCTCCTCCTGATCGTGTCATGGTTGATGCTCGGCAACACTTCGCGGTTCGGATTGGATCGGCCTCCTTTGGGTCCCCTTCAACTCAAGAACCTGTCCGGAAAGACACCAGTGCTTGATGTGGGTACCCTTGCCAAGATTAAAAGTGGACATATTATGATACGTCCGGGAATCAAGCGACTAAGACGTCATACGGTGGAATTCGTTGATGGAAGGATAGAGAACTTTGATGCAATTATATTTGCAACTGGTTACAAAAGCAATGTGCCCTATTGGTTAAAGGAAGGGGATATGTTCTCAAAGGAAGATGGGTACCCTAAGAAGCCATTCCCAAATGGATGGAAGGGAGAAAATGGTCTTTATGCAGTTGGTTTTACCAAAAGAGGTCTACTTGGAGCATCCATGGATGCCAAGAACATAGCAAAAGACATTGAAAGATGTTGGAAAGCTGAGGCAAAGCATAGTACTTTTTCTCTCTCACTTTTGCCACAATCAGTTTCATGA 1269 0.4854 MEYCEREQEGKRLHDPIISRKKAERCVWVPGPVIVGAGPSGLAAAACLKEKGVASVILERSNCIASLWQLNTYDRLRLHLPKQFCXLPLMGFPSNFPTYPTKQQFIRYLESYAEHFAIQPRFNEAVKEAEFDSSLGFWRVKTTTATEFVCRWVIVATGENAEAVVPEIEGXGEFGGTIKHTSLYKSGGEFKGKKVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHILPREMLGKSTFGLSMWLLKWLPIQLVDRLLLIVSWLMLGNTSRFGLDRPPLGPLQLKNLSGKTPVLDVGTLAKIKSGHIMIRPGIKRLRRHTVEFVDGRIENFDAIIFATGYKSNVPYWLKEGDMFSKEDGYPKKPFPNGWKGENGLYAVGFTKRGLLGASMDAKNIAKDIERCWKAEAKHSTFSLSLLPQSVS* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3631 422 SUPERFAMILY FAD/NAD(P)-binding domain 33 233 IPR036188 -
Amo16g3631 422 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 20 410 - -
Amo16g3631 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 194 212 - -
Amo16g3631 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 150 168 - -
Amo16g3631 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 32 51 - -
Amo16g3631 422 Gene3D - 32 408 IPR036188 -
Amo16g3631 422 Pfam Flavin-binding monooxygenase-like 34 347 IPR020946 GO:0004499|GO:0050660|GO:0050661
Amo16g3631 422 PRINTS Pyridine nucleotide disulphide reductase class-II signature 31 53 - -
Amo16g3631 422 PRINTS Pyridine nucleotide disulphide reductase class-II signature 151 159 - -
Amo16g3631 422 PRINTS Pyridine nucleotide disulphide reductase class-II signature 190 214 - -
Amo16g3631 422 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 20 410 - -
Amo16g3631 422 SUPERFAMILY FAD/NAD(P)-binding domain 191 401 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3631 Amo-Chr16 146959281 146966067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3631 K11816 - gmx:100804746 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3631 16 146959281 146966067 Amo16g3631 16 146959281 146966067 ECH
Amo16g3631 16 146959281 146966067 Amo06g2992 06 96164619 96167715 hybridization