Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2992 ATGAGAACTTCATCATCTTCTTGTTCTCTAGAGTGTGTTGAAGGGCCAATCATAGTAGGAGCAGGACCCTCCGGCATAGCCGTAGCCGCCTGTCTATCTCAGTACTCCATTCCTTCAATAATCTTAGAGCGAAGCCACTGCATCGCTTCGCTCTGGCAAAACAAAACCTACGACCGCCTCAAACTCCATCTCCCTAAAAATTTCTGCCAACTCCCTCTAATGGGGTTCCCACAAACCTTCCCAAAGTACCCAACCAAGTACCAGTTCATCTCCTACATGGACTCCTACGCTTCCCATTTCAAGGTTCAACCCAGGTTCAACCAGACAGTCCACGTGGCCGAGTTTGATCCCTCTTCCCAGATTTGGCTCGTTAGGACCCAAGATTCTCTCTACCTTTCCCCTTGGCTCATTGTAGCTACCGGAGAAAATGCCGAACCTATGATTCCCAAGATTCTCGGCATCGACAAGTTTCATGGTGCTGTTGTTCATACTAGCGCCTATAAATCTGGTGATGCTTATAAGAACAAGAAGGTTTTGGTTATTGGTTGTGGAAATTCTGGCATGGAAGTTAGCTTGGATCTTTGTAGACACAATGCTAAGCCTTACATGGTTGCAAGAAATACGATTTTGGGAATATCATCATTTGGAATAGCAATGGCACTATACAAATGGTTTCCACTAAAAATAGTAGACAAGTTTCTGTTGTTGGTGGCAAACATGATGTTGGGAAACACAAGTCATTATGGCATAAGAAGGCCCAAAACAGGTCCAATTGAACTTAAACTTGCCACAGGAAAAACCCCTGTTCTTGATGTTGGTCAAGTAGCACAAATCAAATCCGGTAACATTAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAATGGTGCCAAATTTGTGGATGGACAAGAAAAGGAATTCGATGCTATAATATTGGCAACGGGATACAAGAGCAACGTGCCTACTTGGCTCAAGTTGGATTCACAAGAAGGGGCCTTTCTGGAACTTCCTCAGATGCAGTCAAGATTGCTAATGACATTGCTGATCAATGGAAAACCCTTAAAAAGGACAACAACAACAATTCACATATCATCCAACTCAACAATTCCTAGATCTTAG 1119 0.4343 MRTSSSSCSLECVEGPIIVGAGPSGIAVAACLSQYSIPSIILERSHCIASLWQNKTYDRLKLHLPKNFCQLPLMGFPQTFPKYPTKYQFISYMDSYASHFKVQPRFNQTVHVAEFDPSSQIWLVRTQDSLYLSPWLIVATGENAEPMIPKILGIDKFHGAVVHTSAYKSGDAYKNKKVLVIGCGNSGMEVSLDLCRHNAKPYMVARNTILGISSFGIAMALYKWFPLKIVDKFLLLVANMMLGNTSHYGIRRPKTGPIELKLATGKTPVLDVGQVAQIKSGNIKVMEGVKEITRNGAKFVDGQEKEFDAIILATGYKSNVPTWLKLDSQEGAFLELPQMQSRLLMTLLINGKPLKRTTTTIHISSNSTIPRS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2992 372 PRINTS FAD-dependent pyridine nucleotide reductase signature 16 35 - -
Amo06g2992 372 PRINTS FAD-dependent pyridine nucleotide reductase signature 177 195 - -
Amo06g2992 372 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 12 325 - -
Amo06g2992 372 Gene3D - 15 363 IPR036188 -
Amo06g2992 372 Pfam Pyridine nucleotide-disulphide oxidoreductase 17 208 - -
Amo06g2992 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 134 142 - -
Amo06g2992 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 173 197 - -
Amo06g2992 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 15 37 - -
Amo06g2992 372 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Amo06g2992 372 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 12 325 - -
Amo06g2992 372 PIRSF FMO 16 327 IPR000960 GO:0050660|GO:0050661
Amo06g2992 372 SUPERFAMILY FAD/NAD(P)-binding domain 17 210 IPR036188 -
Amo06g2992 372 SUPERFAMILY FAD/NAD(P)-binding domain 175 329 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2992 Amo-Chr6 96164619 96167715 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2992 K11816 - gmx:100818280 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3631 16 146959281 146966067 Amo06g2992 06 96164619 96167715 hybridization