Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3541 ATGAACGGGAATAGAGGATTGAGCAGTTTGGAGATGGAATACATTCGAAGGCACCATAACCATGAGCCTGGAGAGAATCAGTGCAGCTCGGTTCTCGTTAAGCATATCAAAGCACCGCTTCATCAGGTATGGTCATTGGTGAGGAGGTTTGATCAGCCGCAGAAGTACAAGCCATTCATCAGCAGATGTGTTGTAAGAGGAAACCTTGAGATTGGAAGTGTGAGGGAAGTTAATGTTAAGTCAGGACTTCCTGCCACTACAAGCACAGAAAGATTAGAGCTTCTTGATGACAATGAGCATGTCCTCAGCATCAGGATTGTTGGTGGTGATCATAGACTTAGGAACTACTCATCCATCATGTCGCTTCACCCAGAAGTTATTGATGGAAGGCCAGGTACACTAGTTATTGAATCTTTTGTGGTGGATGTACCRGAGGGAAARACCAAGGATGACACATGCTACTTTGTTGAAGCCTTAATTAAGTGCAATCTCAAATCACTTGCTGATGTATCGGAAGGGCTTGCTGTGCAAGACTGCACTGAACCGATTGATCGATCGAGATGA 564 0.445 MNGNRGLSSLEMEYIRRHHNHEPGENQCSSVLVKHIKAPLHQVWSLVRRFDQPQKYKPFISRCVVRGNLEIGSVREVNVKSGLPATTSTERLELLDDNEHVLSIRIVGGDHRLRNYSSIMSLHPEVIDGRPGTLVIESFVVDVPEGKTKDDTCYFVEALIKCNLKSLADVSEGLAVQDCTEPIDRSR* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3541 187 CDD PYR_PYL_RCAR_like 28 172 - -
Amo16g3541 187 Pfam Polyketide cyclase / dehydrase and lipid transport 31 172 IPR019587 -
Amo16g3541 187 Gene3D - 3 181 IPR023393 -
Amo16g3541 187 PANTHER ABSCISIC ACID RECEPTOR PYL9-LIKE PROTEIN 9 183 - -
Amo16g3541 187 SUPERFAMILY Bet v1-like 28 169 - -
Amo16g3541 187 PANTHER - 9 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3541 Amo-Chr16 145403979 145407433 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3541 K14496 - gmx:100809023 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0179 12 2703474 2706172 Amo16g3541 16 145403979 145407433 ECH
Amo16g3541 16 145403979 145407433 Amo16g3541 16 145403979 145407433 ECH