Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0179 ATGATGAACGGTAGTTGTGGTGGTGGTGGTGGTGGTGAAGCTTATGGTGCCATTGAAGCACAGTACATAAGGAGGCACCATAGGCATGAACCTAGGGACAACCAGTGCACTTCTGCACTTGTCAAACACATAAGAGCTCCTGTTCATCTTGTGTGGTCTCTGGTGAGAAGATTTGATCAACCTCAGAAATATAAACCATTTGTTAGCAGGTGTATCATGCAAGGGGAYCTTGGCATTGGTAGTGTTAGAGAAGTGAATGTTAAATCTGGTCTTCCAGCTACAACCAGCACTGAGAGGTTAGAACAACTTGATGATGAAGAACACATTCTTGGCATAAGAATTGTAGGAGGTGATCACAGGCTGAGGAACTATTCTTCCATAATCACAGTTCATCCGGAGGTCATTGAAGGAAGACCTGGTACAATGGTGATCGAATCGTTTGTCGTGGATGTGCCCGATGGCAACACCAAGGACGAAACTTGCTACTTTGTGGAGGCCTTGATCAGGTGCAACCTTAGCTCTTTGGCTGATGTCTCAGAAAGRATGGCTGTGCAGGGCCGAACCGATCCAATCAACCAGTAA 582 0.4588 MMNGSCGGGGGGEAYGAIEAQYIRRHHRHEPRDNQCTSALVKHIRAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIEGRPGTMVIESFVVDVPDGNTKDETCYFVEALIRCNLSSLADVSERMAVQGRTDPINQ* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0179 193 SUPERFAMILY Bet v1-like 36 177 - -
Amo12g0179 193 CDD PYR_PYL_RCAR_like 36 180 - -
Amo12g0179 193 PANTHER - 11 191 - -
Amo12g0179 193 Gene3D - 10 189 IPR023393 -
Amo12g0179 193 PANTHER ABSCISIC ACID RECEPTOR PYL3-LIKE 11 191 - -
Amo12g0179 193 Pfam Polyketide cyclase / dehydrase and lipid transport 41 180 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0179 Amo-Chr12 2703474 2706172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0179 K14496 - gmx:100500065 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0179 12 2703474 2706172 Amo16g3541 16 145403979 145407433 ECH
Amo12g0179 12 2703474 2706172 Amo12g0179 12 2703474 2706172 ECH