Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3193 ATGTCTCTCTTGGCTAATACCCTGTACCTTTTATTATTCTTTTCATCTTCTGTGCTTCGCGTAGCACAGGGTTCTAGCCGTGCCTCCTTAGGTAGAAAAAACGGTGCTACTACCTTTCCTCCTTCTCTCTTGGGTGATGATGGCATATGCGCCTCTTCTGTTGTTATTCATGGTTACAAGTGCCAGGAACTTCAAGTTACTACTGCAGATGGGTACATTCTTAGCGTCCAAAGAATCCCAGAAGGTAGAAGTGGCAATGGGAATAATCAGACGAAGCAGGCAGTGATACTTCAGCATGGAATATTAGTGGACGGAACGCAATGGCTTTTGAACGGTCCAGAGCAAAATCTGCCACTGATATTAGCTGATAACGGCTTCGATGTTTGGATTTCTAACACCAGAGGCACCAGATTCAGCCGCCGCCATACCTCATTGGACCCTTCTTCTAAGGCGTATTGGGATTGGTCGTGGGATGAACTGGGTAGCTATGATCTACCTGCTGTTGTGGAGTATGTATCCAGCCAAACAGGACAAAAGCCTCATTACGTCGGCCATTCACTGGGAACATTGACAGTTTTGGCTTCCTTGTCGGAAGGGAAATTGGTGAATCAGCTGAAATCAGCAGCATTATTGAGCCCCATAGCCTATTTGAGTCATTTAACCACTCAATTATTAGATGTTGCAGCTAAGTTTTATCTAGACGAGTTCATTCGAATATTTGGGCTATCGGAATTCATTCCCAAAGGGATACCTGTTCAAGCCTTTCTCAAGCTAGTTTGCGATCACCCTGGAGTAGATTGTTACGACTTGTTGCCTGTTATAACCGGTAAAAATTGTTGCCTCAATTCTTCAACTATTGATTTATTATTGAAGAATGCACCTCAGTCAACAGCAACAAAGAATTTGATACACTTGGCCCAGACTATTAGAAGTGGGGTTCTTGCAAAGTATAATTACGTGAGACCAGACTATAATTTTATGCACTATGGAGAAGCAGTCCCTCCAGTTTACAACTTATCTAATATCCCTCATGACCTACCTCTATTTCTGAGCTATGGTGCTCGAGATGCTCTTTCTGATGTTGTTGATGTGCAAACTTTACTTGATTCCCTAAAGTCTCATGATGCTGATAAGCTTAGTGTTCAGTTCATCAAGGACTATGCTCATCTTGATTTCGTTATGGGGGTCAATGCCAAAGACGTAGTGTACAATGCTGTCATTTCATTTTTCAACCGTCAATTTAATTAA 1248 0.4239 MSLLANTLYLLLFFSSSVLRVAQGSSRASLGRKNGATTFPPSLLGDDGICASSVVIHGYKCQELQVTTADGYILSVQRIPEGRSGNGNNQTKQAVILQHGILVDGTQWLLNGPEQNLPLILADNGFDVWISNTRGTRFSRRHTSLDPSSKAYWDWSWDELGSYDLPAVVEYVSSQTGQKPHYVGHSLGTLTVLASLSEGKLVNQLKSAALLSPIAYLSHLTTQLLDVAAKFYLDEFIRIFGLSEFIPKGIPVQAFLKLVCDHPGVDCYDLLPVITGKNCCLNSSTIDLLLKNAPQSTATKNLIHLAQTIRSGVLAKYNYVRPDYNFMHYGEAVPPVYNLSNIPHDLPLFLSYGARDALSDVVDVQTLLDSLKSHDADKLSVQFIKDYAHLDFVMGVNAKDVVYNAVISFFNRQFN* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3193 415 Gene3D alpha/beta hydrolase 49 412 IPR029058 -
Amo16g3193 415 SUPERFAMILY alpha/beta-Hydrolases 57 411 IPR029058 -
Amo16g3193 415 PANTHER TRIACYLGLYCEROL LIPASE 2 37 413 - -
Amo16g3193 415 PIRSF Steryl_ester_lip 1 415 IPR025483 GO:0016788
Amo16g3193 415 Pfam Partial alpha/beta-hydrolase lipase region 56 112 IPR006693 GO:0006629
Amo16g3193 415 PANTHER LYSOSOMAL ACID LIPASE-RELATED 37 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3193 Amo-Chr16 136375729 136383713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3193 47 413 Acyl Lipid Metabolism Gene Families AT2G15230 38.692 6.51e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3193 K01052 - gmx:100779460 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3193 16 136375729 136383713 Amo16g3193 16 136375729 136383713 ECH
Amo16g3193 16 136375729 136383713 Amo06g2677 06 90724354 90755376 hybridization