Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2677 ATGTCTCTCTTGGCTATTACCTTGTGGCTTTTATTTTTCTTTTCATCTTCTGTGGTTCATTCAGGAGCACAGGGCTCTAGCCGTGGCTCCTTAGGTGATGGCATATGTGCCACTTCTGTTGTTGTTCATGGTTACAACGTCCAAAGAATCCCAGAAGGTAGAAGTGGTAATGGGAATAATAATAAGAAGCAGCCAGTGATAATTCAGCATGGACTATTAGTGGACGGAATGACATGGCTTTTGAACGGTCCAGAGCAAAACCTGCCATTGATATTAGCTGATAACGGCTTCGATGTTTGGATTTCTAACACCAGAGGCACCAGATTTAGCCGCCGCCATATCTCATTGGACCCTTCTACTCCGGCGTACTGGAATTGGACGTGGGATGAACTGGGTAGCTATGATCTACGTGCTGTTGTGGAGTATGTGTCCAACCATACAGGACAAAAGATTCATTACATCGGCCATTCACAGGGAACATTGATAGCTTTGACTTCCTTCTCGGAAGGGAAATGGGTGAATAAACTGAAATCAGCAGCACTATTGAGCCCAGTAGCCTATTTGAGTCATATGACCACTGAACTATTAAATGTTGCAGATAGGTTATTTCTTGATCAGAATGAACCTCAGTCAACATCAACAAAGAATTTGATACACTTTGCCCAGATTGTTAGAAGTGGGGTTGTGGCAAAGTTTAATTATGGGATACGAGACCAAAATATTAGGATCTATGGAAAAGCATCCCCTCCAATTTACAACCTATCTAATATCCCTCATGACCTACCTCTATTTCTCAGCTATGGTGGTCGAGATGCTCTTTCTGATGTTGTTGATGTGCAAACTTTACTTGATTCTCTAAAGTTTCATGATGTTGATAAGCTTAGTGTTCAGTTCATCAAAGACTATGCTCATGTTGATTTCATTATGGGGGTCAATGCCAAAGACATAGTGTACAATGCTGGCTCTAGCCGTGGCTCCTTAGGTGATGGCATATGTGCCTCTTCTGTTGTTGTTCATGGTTACAAGTGCCAGGAACTTCAAGTTACAACTGCAGATGGGTACATTCTTAGCGTCCAAAGAATCCCAGAAGGTAGAAGTGGCAATGGGAATAATAATAATAAGAAGCAGCCAGTGATAATTCAGCATGGAATATTAGTGGACGGAATGACATGGCTTTTGAACGGTCCAGAGCAAAACCTGCCACTGATATTAGCTGATAACGGCTTCGATGTTTGGATTTCTAACACCAGAGGCACCAGATTTAGCCGCCGCCATATCTCATTGGACCCTTCTACTCCGGCGTACTGGAATTGGACGTGGGATGAACTGGGTAGCTATGATCTACGTGCTGTTGTGGAGTATGTGTCCAACCATACAGGACAAAAGATTCATTACATCGGCCATTCACAGGGAACATTGATAGCTTTGACTTCCTTCTCGGAAGGGAAATGGGTGAATAAACTGAAATCAGCAGCACTATTGAGCCCAGTAGCCTATTTGAGTCATATGACCACTGAACTATTAAATGTTGCAGATAGGTTATTTCTTGATCAGATATATTTTTTAAAACTTTTATGTGTGTTGATACCTTTTCAATCCTTTCTCAAGCAACTTTGCGCTCAGCCTGGAGTTGATTGTTCGGACTTGTTCACTGCTATAACCGTTGTTAGAAGTGGGGTTGTGGCAAAGTTTAATTATGGGAGAAGAGACCAAAATATTAGGATCTATGGAAAAGCATCCCCTCCAATTTACAACCTATCTAATATCCCTCATGACCTACCTCTATTTCTGAGCTATGGTGCTCGAGATGCTCTTTCTGATGTTGTTGATGTGCAAACTTTACTTGATTCCCTAAAGTCTCATGATGCTGATAAGCTTAGTGTTCAGTTCATCAAGGACTATGCTCATCTTGATTTCGTTATGGGGGTCAATGCCAAAGACATAGTGTACAATGCTGTCATTTCATTTTTCAACAGATTTAATTAA 1986 0.4159 MSLLAITLWLLFFFSSSVVHSGAQGSSRGSLGDGICATSVVVHGYNVQRIPEGRSGNGNNNKKQPVIIQHGLLVDGMTWLLNGPEQNLPLILADNGFDVWISNTRGTRFSRRHISLDPSTPAYWNWTWDELGSYDLRAVVEYVSNHTGQKIHYIGHSQGTLIALTSFSEGKWVNKLKSAALLSPVAYLSHMTTELLNVADRLFLDQNEPQSTSTKNLIHFAQIVRSGVVAKFNYGIRDQNIRIYGKASPPIYNLSNIPHDLPLFLSYGGRDALSDVVDVQTLLDSLKFHDVDKLSVQFIKDYAHVDFIMGVNAKDIVYNAGSSRGSLGDGICASSVVVHGYKCQELQVTTADGYILSVQRIPEGRSGNGNNNNKKQPVIIQHGILVDGMTWLLNGPEQNLPLILADNGFDVWISNTRGTRFSRRHISLDPSTPAYWNWTWDELGSYDLRAVVEYVSNHTGQKIHYIGHSQGTLIALTSFSEGKWVNKLKSAALLSPVAYLSHMTTELLNVADRLFLDQIYFLKLLCVLIPFQSFLKQLCAQPGVDCSDLFTAITVVRSGVVAKFNYGRRDQNIRIYGKASPPIYNLSNIPHDLPLFLSYGARDALSDVVDVQTLLDSLKSHDADKLSVQFIKDYAHLDFVMGVNAKDIVYNAVISFFNRFN* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2677 661 Gene3D alpha/beta hydrolase 332 659 IPR029058 -
Amo06g2677 661 Gene3D alpha/beta hydrolase 44 206 IPR029058 -
Amo06g2677 661 PANTHER TRIACYLGLYCEROL LIPASE 2 29 205 - -
Amo06g2677 661 PANTHER TRIACYLGLYCEROL LIPASE 2 555 660 - -
Amo06g2677 661 PANTHER TRIACYLGLYCEROL LIPASE 2 206 320 - -
Amo06g2677 661 PANTHER TRIACYLGLYCEROL LIPASE 2 328 554 - -
Amo06g2677 661 SUPERFAMILY alpha/beta-Hydrolases 57 319 IPR029058 -
Amo06g2677 661 SUPERFAMILY alpha/beta-Hydrolases 339 658 IPR029058 -
Amo06g2677 661 Pfam alpha/beta hydrolase fold 65 196 IPR000073 -
Amo06g2677 661 Pfam Partial alpha/beta-hydrolase lipase region 339 395 IPR006693 GO:0006629
Amo06g2677 661 PANTHER LYSOSOMAL ACID LIPASE-RELATED 206 320 - -
Amo06g2677 661 PANTHER LYSOSOMAL ACID LIPASE-RELATED 29 205 - -
Amo06g2677 661 PANTHER LYSOSOMAL ACID LIPASE-RELATED 555 660 - -
Amo06g2677 661 PANTHER LYSOSOMAL ACID LIPASE-RELATED 328 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2677 Amo-Chr6 90724354 90755376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2677 324 658 Acyl Lipid Metabolism Gene Families AT2G15230 34.140 3.12e-71 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2677 K01052 - gmx:100779460 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3193 16 136375729 136383713 Amo06g2677 06 90724354 90755376 hybridization