Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3062 CGCCTGATACTTCTGTCCTTCAGTGCGCCACATCCCGCGGCCAGAAACTCTTCGTTGACCCTGCGGCGGCAGTGTCGCACGAGAATGCTTCAATGGCTCTCCTCAAAATCTCTTCCGCCACACGCTTCTACTTCAGCTCCCACTCTCCCTCTGTCTCCTGCATCTGCTCCTCCCCATTCCCAAGGCAACTCCACCGAAAATTCAAGCACTGCTTCCTCGCCAGGCCCTAACATTGCTCGCGCATACGACGACGCCGTTCAGGCCAACTCCTACAACGAGATTCGTTCCGTGATCCAAGCTCCCCTGCAGGACCACCTACACCTGCACCAACAAATCCATGAGGTTGAGCTCATTGACGAAGAGGACAAAGAAGACTCGCATCACCGCCACGTGCTCGCCCACGCGCTCCGTCCCGATCGACAGAGCATCCGGGAGGCTCTCGCTAACGCCGAATCCCGCCGCGGCGCCGCCACACTCACTAGACTCGCCTCCGATTACTTCGACCATAGCGAGAAAACCTGCGGAATCTACCTCCTCCTTCACCGCAGCGTCCGCCGCGCACGCGACATATACAAGCCTCTCCACGAACTCATCGCCGTTCTCCCCGACGACGCTTCCGGTTCCTTCAACCGCCATCTCTGCGACCGCGCTTTCGATCTCTTCGTCCAATTCGACAGCCAGGAAAACCCGTTCGTCTTCCCGCACAACTTCTCCGACGTCCGTGACAGCTTATCCGGCCTCAAGCTCGAGATTGAACGCCGGCGCTTGCGGTGCTATGCGAGGATTCGCCTCCTCAAACGGTTCCACACGAGTTGTCTGGCCTGTTTAGTTGTAACCGCCGTGGGAGCAGTGATCTCGGCCGTGCTGGTCACTGCGCATGCGGTCGCAGGCTTTGCTGCGGTTGCTGCCTGCGGCGGCTCGTGTCTTCCAAAGAAGAAGGTAAAGAAGGAACTTACAAGGTTGAATCAGCTGAATGCTGCATCAAAGGGTACTCTTGTGATGAATGACATTGACACTGTGAATAGCCTTGTTGATCGGTTGCAAACTGCGGTGGAGGGAGACCGGGTGCTGATTCAGTTCGCGCTGAACCGGGGGAGGGAGAGGCATCCCATTCAGGAGGTTCTGAAGCAGCTCCGCAAGAACCAGCAGAGTTTTGAACCGCTGCTTTCCGAACTTGAGGTACAGATATATCTCTGCTTCAATGCTGTTAATAAGGCTAGAATGTTGCTGCTTCAAGAGATATGTCTTTATCCCAATTTGTAG 1263 0.5598 RLILLSFSAPHPAARNSSLTLRRQCRTRMLQWLSSKSLPPHASTSAPTLPLSPASAPPHSQGNSTENSSTASSPGPNIARAYDDAVQANSYNEIRSVIQAPLQDHLHLHQQIHEVELIDEEDKEDSHHRHVLAHALRPDRQSIREALANAESRRGAATLTRLASDYFDHSEKTCGIYLLLHRSVRRARDIYKPLHELIAVLPDDASGSFNRHLCDRAFDLFVQFDSQENPFVFPHNFSDVRDSLSGLKLEIERRRLRCYARIRLLKRFHTSCLACLVVTAVGAVISAVLVTAHAVAGFAAVAACGGSCLPKKKVKKELTRLNQLNAASKGTLVMNDIDTVNSLVDRLQTAVEGDRVLIQFALNRGRERHPIQEVLKQLRKNQQSFEPLLSELEVQIYLCFNAVNKARMLLLQEICLYPNL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3062 420 MobiDBLite consensus disorder prediction 36 76 - -
Amo16g3062 420 PANTHER OS04G0405700 PROTEIN 57 416 - -
Amo16g3062 420 MobiDBLite consensus disorder prediction 36 79 - -
Amo16g3062 420 PANTHER UPF0496 PROTEIN 3-RELATED 57 416 IPR007749 -
Amo16g3062 420 Pfam Protein of unknown function (DUF677) 156 414 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3062 Amo-Chr16 132812323 132814023 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3062 - - adu:110273042 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3062 16 132812323 132814023 Amo06g2448 06 86323646 86325299 hybridization