Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2448 TCTTCGTTGACCCTGCGGCGGCAGTGTCGCACGAGAATGCTTCAATGGCTCTCCTCAAAATCTCTTCCGCCACACGCTTCTACTTCAGCTCCCACTCTCCCTCTGTCTCCTGCATCTGCTCCTCCCCATTCCCAAGGCAACTCCACCGAAAATTCAAGCACTGCTTCCTCGCCAGGCCCTAATATTGCTCGCGCATACGACGACGCCGTTCAGGCCAACTCCTACAACGAGATTCGTTCCGTGATCCAAGCTCCCCTGCAGGACCACCTACACCTGCACCAACAAATCCATGAGGTTGAGGTCATTGACGAAGAGGACAAAGAAGACTCGCATCACCGCCACGTGCTCGCCCACGCGCTCCGTCCCGATCGACAGAGCATCCGGGAGGCTCTCGCTAACGCCGAATCCTGCCGCGGCGCCGCCACACTCACTAGACTCGCCTCCGATTACTTCGACCATAGCGAGAAAACCTGCGGAATCTACCTCCTCCTTCACCGCAGCGTCCGCCGCGCACGCGACATATACAAGCCTCTCCACGAACTCATCGCCGTTCTCCCCGACGACGCTTCCGGCTCCTTCAACCGCCATCTCTGCGACCGCGCTTTCGATCTCTTCGTCCAATTCGACAGCCAGGAAAACCCGTTCGTCTTCCCGCACAACTTCTCCGACGTCCGTGACAGCTTATCCGGCCTCAAGCTCGAGATTGAACGACGGCGCTTGCGGTGCTATGCGAGGATTCGCCTCCTCAAACGGTTCCACACGAGTTGTCTGGCCTGTTTAGTTGTAACCGCCGTGGGAGCAGTGATCTCGGCCGTGCTGGTCACTGCGCATGCCGTTGCCGGCTTTGCTGCGGTTGCTGCCTGCGGCGGCTCGTGTCTTCCAAAGAAGAAGGTAAAGAAGGAACTTACAAGGTTGAATCAGCTGAATGCTGCATCAAAGGGTACTCTTGTGATGAATGACATTGACACTGTGAATAGCCTTGTTGATCGGTTGCAAACTGCGGTGGAGGGAGACCGGGTGCTGATTCAGTTCGCGCTGAACCGGGGGAGGGAGAGGCATCCCATTCAGGAGGTTCTGAAGCAGCTCCGCAAGAACCAGCAGAGTTTTGAACCGCTGCTTTCCGAACTTGAGGTACAGATATATCTCTGCTTCAATGCTGTTAATAAGGCTAGAATGTTGCTGCTTCAAGAGATATGTCTTTATCCCAATTTGTAG 1215 0.5564 SSLTLRRQCRTRMLQWLSSKSLPPHASTSAPTLPLSPASAPPHSQGNSTENSSTASSPGPNIARAYDDAVQANSYNEIRSVIQAPLQDHLHLHQQIHEVEVIDEEDKEDSHHRHVLAHALRPDRQSIREALANAESCRGAATLTRLASDYFDHSEKTCGIYLLLHRSVRRARDIYKPLHELIAVLPDDASGSFNRHLCDRAFDLFVQFDSQENPFVFPHNFSDVRDSLSGLKLEIERRRLRCYARIRLLKRFHTSCLACLVVTAVGAVISAVLVTAHAVAGFAAVAACGGSCLPKKKVKKELTRLNQLNAASKGTLVMNDIDTVNSLVDRLQTAVEGDRVLIQFALNRGRERHPIQEVLKQLRKNQQSFEPLLSELEVQIYLCFNAVNKARMLLLQEICLYPNL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2448 404 MobiDBLite consensus disorder prediction 16 63 - -
Amo06g2448 404 PANTHER UPF0496 PROTEIN 3-RELATED 42 400 IPR007749 -
Amo06g2448 404 Pfam Protein of unknown function (DUF677) 128 398 IPR007749 -
Amo06g2448 404 PANTHER OS04G0405700 PROTEIN 42 400 - -
Amo06g2448 404 MobiDBLite consensus disorder prediction 16 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2448 Amo-Chr6 86323646 86325299 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2448 - - adu:110273042 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3062 16 132812323 132814023 Amo06g2448 06 86323646 86325299 hybridization