Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3055 AAAAAAACCCTAATCTTCAAAGAAGCCCCCTGCAACCTACTGCTCACACTCACAGCACTAAAGCACACAGAGACAGAGCTCAAAGCCTCGATCTTCTCTGTCGCCGCCTCTCGCCGGCCCCCCTCTCGTCGCTGCGCCGCTCGCGTCTTCCTCTGCGTCACGCGCCGCACGCGTCTTCCTCTGCGTCACCGCGCCGCACGCGTCTTCCTCCGCGTCACCGCCGCTCGCGTCTTCCTCTGCATCACCGCGCCCCTCGCGTCTTCCGCTGTGCTTTGCCGTGGCTCAGTTCTCTGTCGCCCTCTTCTCTGCGTGCGGCCAAGGAATACTGTGACATTTTATTGGAACATTGAGGCTTTGGTTCTGCTTCTGAACTTCTGCAGAGGTTTGAAAATGACCATTTCCTATGCTCACATGCTTCAATTTTCCACTAGTTTCCTCAATGGCAAGCTATCATTTACCAGTGACAATAAAGGGAGAAGGACACACATCTTACCTTTTGCTTCGTTGGAGAGACCAGACAAAAATATTGTCATTGACCCCAAGGTAGACTCTCTGCTGGACAGTGTAAAATGGGATGATAAAGGTTTGGCTGTGGCAATAGCTCAGAATGTTGACACTGGAGCCATATTAATGCAAGGTTTTGCAAATAGAGAAGCAGTGTTTACAACCCTATCTTCCCGGAAGGCTACGTTCTTCAGTCGGTCACGGTCAACATTGTGGACCAAAGGAGAGACTTCTAATAATTTTATAAATATTCACGATGTTTTTCTTGACTGTGATCGTGATTCTATAATATACCTCGGGAAACCTGATGGACCTACCTGCCACACAGGGGCAGAAACATGCTATTATACATCAGTCTTTGACTCACTAAAACAGCAAGAGATTGAAGGAAATAGGTTGGCATTAACCTCTTTGTATTCATTAGAGTCGACAATCTCCCAACGCAAAGCAGAGTTAGCAGAAGAAGAGAATGGAAAGCCCTCATGGACTAAGCGATTATTGCTCAATGATAAGTTGTTGTGCTCAAAAATCAGAGAAGAGGCAAATGAGTTGTGTCAAACACTAGAGAATAACGAGGACAAGTCACGTACTGCTTCAGAGATGGCTGATGTACTCTATCATGCGATGGTACTGTTGGCAGTGAAAGATGTCAAAGTAGAAGATGTTCTGCAGGTTCTTCGGCAGAGATTTTTCCAATCTGGTATCGAGGAAAAGAAAAGTCGAGTATCCAAGAAATCAGAGCAAGATTGA 1254 0.4673 KKTLIFKEAPCNLLLTLTALKHTETELKASIFSVAASRRPPSRRCAARVFLCVTRRTRLPLRHRAARVFLRVTAARVFLCITAPLASSAVLCRGSVLCRPLLCVRPRNTVTFYWNIEALVLLLNFCRGLKMTISYAHMLQFSTSFLNGKLSFTSDNKGRRTHILPFASLERPDKNIVIDPKVDSLLDSVKWDDKGLAVAIAQNVDTGAILMQGFANREAVFTTLSSRKATFFSRSRSTLWTKGETSNNFINIHDVFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDSLKQQEIEGNRLALTSLYSLESTISQRKAELAEEENGKPSWTKRLLLNDKLLCSKIREEANELCQTLENNEDKSRTASEMADVLYHAMVLLAVKDVKVEDVLQVLRQRFFQSGIEEKKSRVSKKSEQD* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3055 417 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 144 410 - -
Amo16g3055 417 PANTHER BNAC05G24080D PROTEIN 144 410 - -
Amo16g3055 417 TIGRFAM histidine_hisI: phosphoribosyl-ATP diphosphatase 306 394 IPR008179 GO:0000105|GO:0004636
Amo16g3055 417 Coils Coil 342 366 - -
Amo16g3055 417 Gene3D - 303 398 - -
Amo16g3055 417 SUPERFAMILY all-alpha NTP pyrophosphatases 306 398 - -
Amo16g3055 417 CDD NTP-PPase_HisIE_like 306 394 IPR008179 GO:0000105|GO:0004636
Amo16g3055 417 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 323 397 IPR021130 -
Amo16g3055 417 Gene3D - 180 275 IPR038019 -
Amo16g3055 417 SUPERFAMILY HisI-like 186 290 IPR038019 -
Amo16g3055 417 Pfam Phosphoribosyl-AMP cyclohydrolase 211 284 IPR002496 GO:0000105|GO:0004635
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3055 Amo-Chr16 132663525 132668483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3055 K11755 - gmx:100807276 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3055 16 132663525 132668483 Amo16g3055 16 132663525 132668483 ECH
Amo16g3055 16 132663525 132668483 Amo06g2433 06 85785760 85790954 hybridization