Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2433 ATAGAGAATAGAAAAGTTCATTTTGGAGGGAAAACGGAATCACGAGGGATCGACACCTCACCTTCATTAGACCGGAGACAGATAAGAGCCGGTGTAAAACGGTTTGATCTGGTCGAAGCCCCCTGCAACCTACTGCTCACACTCCCAGCACTAAAACACACAGAGGCAGAGCTCAAAGCCTCGATCTTCTCTGTCGCCGCCTCTCGCCGGCCCCCGTCTCGTCGCTGCGCCGTTCGCCTCTTCCTCTGCGTCACTGCGCCGCACGCGTCTTCCTCTGTGCCGTACGCTTCTTCCTCTGCGTCACCGAGCCGCTCGCGTCTTCCTCTGTGCCCCTGCACCGCACGCGTCTTCTTCCGCGTCTTCCTCCGCGTCACCGCCGCTCGCGTCTTCCTCTGCATCACCGCGCCCCTCGCGTCTTCCGCTGTGCTTTGCCGTGGCTCGGTTTTCTATCGCCCTCTTCTCTGCGTGCGGCCAAGGAATACTGTGACATTTTATTGGAACATTGAGGCTTTGGTTCTGCTTCTGAACTTCTGCAGAGGTTTGAAAATGACCATTTCCTATGCTCACATGCTTCAATTTTCCACTAGTTTCCTCAATGGCAAGCTATCATTTACCAGTGACAATAAAGGGAGAAGGACACACATCTTACCTTTTGCTTCGTTGGAGAGACCAGACAAAAATATTGTCATTGACCCCAAGGTAGACTCTCTGCTGGACAGTGTAAAATGGGATGATAAAGGTTTGGCTGTGGCAATAGCTCAGAATGTTGACACTGGAGCCATATTAATGCAAGGTTTTGCAAATAGAGAAGCAGTGTTTACAACCCTATCTTCCCGGAAGGCTACGTTCTTCAGTCGGTCACGGTCAACATTGTGGACCAAAGGAGAGACTTCTAATAATTTTATAAATATTCACGATGTTTTTCTTGACTGTGATCGTGATTCTATAATATACCTCGGGAAACCTGATGGACCTACCTGCCACACAGGGGCAGAAACATGCTATTATACATCAGTCTTTGACTCACTAAAACAGCAAGAGATTGAAGGAAATAGGTTGGCATTAACCTCTTTGTATTCATTAGAGTCGACAATCTCCCAACGCAAAGCAGAGTTAGCAGAAGAAGAGAATGGAAAGCCCTCATGGACTAAGCGATTATTGCTCAATGATAAGTTGTTGTGCTCAAAAATCAGAGAAGAGGCAAATGAGTTGTGTCAAACACTAGAGAATAACGAGGACAAGTCACGTACTGCTTCAGAGATGGCTGATGTACTCTATCATGCCATGGTACTGTTGGCAGTGAAAGATGTCAAAGTAGAAGATGTTCTGCAGGTTCTTCGGCAGAGATTTTTCCAATCTGGTATCGAGGAAAAGAAAAGTCGAGTATCCAAGAAATCAGAGCAAGATTGA 1410 0.4745 IENRKVHFGGKTESRGIDTSPSLDRRQIRAGVKRFDLVEAPCNLLLTLPALKHTEAELKASIFSVAASRRPPSRRCAVRLFLCVTAPHASSSVPYASSSASPSRSRLPLCPCTARVFFRVFLRVTAARVFLCITAPLASSAVLCRGSVFYRPLLCVRPRNTVTFYWNIEALVLLLNFCRGLKMTISYAHMLQFSTSFLNGKLSFTSDNKGRRTHILPFASLERPDKNIVIDPKVDSLLDSVKWDDKGLAVAIAQNVDTGAILMQGFANREAVFTTLSSRKATFFSRSRSTLWTKGETSNNFINIHDVFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDSLKQQEIEGNRLALTSLYSLESTISQRKAELAEEENGKPSWTKRLLLNDKLLCSKIREEANELCQTLENNEDKSRTASEMADVLYHAMVLLAVKDVKVEDVLQVLRQRFFQSGIEEKKSRVSKKSEQD* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2433 469 PANTHER BNAC05G24080D PROTEIN 196 462 - -
Amo06g2433 469 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 196 462 - -
Amo06g2433 469 Gene3D - 232 327 IPR038019 -
Amo06g2433 469 Gene3D - 355 450 - -
Amo06g2433 469 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 375 449 IPR021130 -
Amo06g2433 469 TIGRFAM histidine_hisI: phosphoribosyl-ATP diphosphatase 358 446 IPR008179 GO:0000105|GO:0004636
Amo06g2433 469 MobiDBLite consensus disorder prediction 1 22 - -
Amo06g2433 469 Pfam Phosphoribosyl-AMP cyclohydrolase 263 336 IPR002496 GO:0000105|GO:0004635
Amo06g2433 469 Coils Coil 394 418 - -
Amo06g2433 469 CDD NTP-PPase_HisIE_like 358 446 IPR008179 GO:0000105|GO:0004636
Amo06g2433 469 SUPERFAMILY HisI-like 238 342 IPR038019 -
Amo06g2433 469 SUPERFAMILY all-alpha NTP pyrophosphatases 358 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2433 Amo-Chr6 85785760 85790954 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2433 K11755 - gmx:100807276 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3055 16 132663525 132668483 Amo06g2433 06 85785760 85790954 hybridization