Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3051 ATGTCGTGTTTGTCAGCAAGAACAGGACGACAAAGACAGCGTTATGAAGGAAATTTGCGCCTTGTCTCCGGGTGTATTCCCTATAGGTGGATAAAGGACAGCACAGATCAAACGGGCGAAACAGAGGAAATGATAGAAGTACTGATGGTTTCTTCGCCGAAACGCGATGATCTTGTATTTCCAAAGGGTGGATGGGAGGATGATGAAACTGTTACGGAAGCCGCATGCCGCGAAGCATTAGAGGAAGCAGGAGTTAAAGGAATTCTAAGAGAAGTTCCACTGGGAATATGGGAATTCAGAAGCAAAAGCAACCTTGACTTATGTTGTACGGAAGGTGGTTGTAAAGGATACATGTTTGCCATGGAGGTTACCGAAGAACTTCACACTTGGCCGGAGCAAAATAACCGCAGTCGCCAATGGTTAAACATAAAGCAGGCATTTAGTCTGAGCCGGTACGAGTGGATGTGTAGCGCGCTCGAGGAGTTTCTTAAAGTCATGGAAGAAGAAAGAAAGCTTGAGAAGCAAGATGATGATAGCATTGGTTGCCCTTCAAGTCTAGTAGCAGATGTTTCAGAATCTCAAAGTATGGCACCACCTAAGTGCTATAAAAGATCCTCTACTATGCCACACCATAGTATGAATTCTAAGAAAAACATCTTATCATGTGCTTCTTAA 675 0.4385 MSCLSARTGRQRQRYEGNLRLVSGCIPYRWIKDSTDQTGETEEMIEVLMVSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREVPLGIWEFRSKSNLDLCCTEGGCKGYMFAMEVTEELHTWPEQNNRSRQWLNIKQAFSLSRYEWMCSALEEFLKVMEEERKLEKQDDDSIGCPSSLVADVSESQSMAPPKCYKRSSTMPHHSMNSKKNILSCAS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3051 224 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 4 166 - -
Amo16g3051 224 MobiDBLite consensus disorder prediction 190 224 - -
Amo16g3051 224 Pfam NUDIX domain 46 151 IPR000086 -
Amo16g3051 224 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Amo16g3051 224 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Amo16g3051 224 MobiDBLite consensus disorder prediction 207 224 - -
Amo16g3051 224 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 187 - -
Amo16g3051 224 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 187 - -
Amo16g3051 224 SUPERFAMILY Nudix 11 164 IPR015797 -
Amo16g3051 224 CDD Nudix_Hydrolase_9 21 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3051 Amo-Chr16 132525620 132529753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3051 K07766 - gmx:100794003 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3051 16 132525620 132529753 Amo16g3051 16 132525620 132529753 ECH
Amo16g3051 16 132525620 132529753 Amo06g2424 06 85537434 85541696 hybridization