Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3024 ATGAAGAACAGTGCATCAAGGTTGTTAAAGAAGATCATAGCCGGTCTTAGCGCAATGGCGAAATCAAAGACACTCGCATTGAAGTCGAAGACAAACGCCATAAAGGCGCGTCTGATCATATTCTCGCTCATGAAGAACAAGAAGTTCCTCATGAGTTCCATCTCGGAGAAGTTCCACTCCGTGTTGGGCCATCATAATAAGGAAGACGAAGCTAACAGCAACAATTTCTTATTGGAAGATGGGAACGAGAACGAACACAATCAGAATCAGAATCAGAATCGCAAGAACAAGAACAAGAACGCCATTGTGTTGTTCCGGAACAACGCTCAGAGCTACGAGAAGGTTCCGAATCCAAGCGAGACGCAGTTCGTGGAAGATGAAGGAGGTTGTTACTACAATTACGATGATGGTGGTGATGGTGATGATGATGAGAAGTACCCTGATCTGACGCACACGCTGTTTGATTCAGAGGATTTGGATCTTGAAGGATCGGTGATTGATTTGGTGAAGAACTCGAAGGAAGAGAGAGGACAAGAATTTAAGTTGGAGGATGAGATTGATCAATGTGCTGCTCTTTTCATTAAGAGATTCCGCAGGCAAATGATTCTTCAAAAGCAGGAATCTTTGAAGAGGCAGCAAGAAGAGCTCACCAACAATGCAGCATGA 666 0.4399 MKNSASRLLKKIIAGLSAMAKSKTLALKSKTNAIKARLIIFSLMKNKKFLMSSISEKFHSVLGHHNKEDEANSNNFLLEDGNENEHNQNQNQNRKNKNKNAIVLFRNNAQSYEKVPNPSETQFVEDEGGCYYNYDDGGDGDDDEKYPDLTHTLFDSEDLDLEGSVIDLVKNSKEERGQEFKLEDEIDQCAALFIKRFRRQMILQKQESLKRQQEELTNNAA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3024 221 MobiDBLite consensus disorder prediction 75 99 - -
Amo16g3024 221 PANTHER COTTON FIBER PROTEIN 1 218 - -
Amo16g3024 221 Coils Coil 199 219 - -
Amo16g3024 221 Pfam Cotton fibre expressed protein 183 216 IPR008480 -
Amo16g3024 221 PANTHER EMB|CAB67623.1-RELATED 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3024 Amo-Chr16 131622361 131623663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3024 - - lang:109361692 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3024 16 131622361 131623663 Amo16g3024 16 131622361 131623663 ECH
Amo16g3024 16 131622361 131623663 Amo06g2391 06 84562471 84563694 hybridization