Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2391 ATGAAGAACAGTGCATCAAGGTTGTTAAAGAAGATCATAGCCGGTCTTAGCGCAATGGCGAAATCAAAGACACTCGCATTGAAGTCGAAGACAAACGCCATAAAGGCGCGTCTGATCATATTCTCGCTCATGAAGAACAAGAAGTTCCTCATGAGTTCCATCTCGGAGAAGTTCCACTCCGTGTTGGGCCATCATAATAAGGAAGACGAAGCTAACAGCAACAATTTCTTATTGGAAGATGGGAACGAGAACGAACACAATCAGAATCAGAATCAGAATCGCAAGAACAAGAACAAGAACGCCATTGTGTTGTTCCGGAACAACGCTCAGAGCTACGAGAAGGTTCCGAATCCAAGCGAGACGCAGTTCGTGGAAGATGAAGGAGGTTGTTACTACAARTACGATGATGGTGGTGATGYTGYTGATGATGATGAGAAGTACCCTGATCTGACGCACACGCTGTTTGATTCAGAGGATTTGGATCTTGAAGGYTCGGTGATTGATTTGGTGAAGAACTCGAAGGAAGAGAGAGGACAAGAATTTAAGTTGGAGGATGAGATTGATCAATGTGCTGCTCTTTTCATTAAGAGATTCCGCAGGCAAATGATTCTTCAAAAGCAGGAATCTTTGAAGAGGCAGCAAGAAGAGCTCACCAACAATGCAGCATGA 669 0.438 MKNSASRLLKKIIAGLSAMAKSKTLALKSKTNAIKARLIIFSLMKNKKFLMSSISEKFHSVLGHHNKEDEANSNNFLLEDGNENEHNQNQNQNRKNKNKNAIVLFRNNAQSYEKVPNPSETQFVEDEGGCYYKYDDGGDXXDDDEKYPDLTHTLFDSEDLDLEGSVIDLVKNSKEERGQEFKLEDEIDQCAALFIKRFRRQMILQKQESLKRQQEELTNNAA* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2391 222 MobiDBLite consensus disorder prediction 75 99 - -
Amo06g2391 222 Pfam Cotton fibre expressed protein 184 217 IPR008480 -
Amo06g2391 222 Coils Coil 200 220 - -
Amo06g2391 222 PANTHER COTTON FIBER PROTEIN 1 219 - -
Amo06g2391 222 MobiDBLite consensus disorder prediction 65 99 - -
Amo06g2391 222 PANTHER EMB|CAB67623.1-RELATED 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2391 Amo-Chr6 84562471 84563694 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2391 - - lang:109361692 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3024 16 131622361 131623663 Amo06g2391 06 84562471 84563694 hybridization