Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3015 ATGGATTCAAATAATAATATGAGGACAGAGAGTTACCTGCGCCACGTCGATTCAAGGAAGTTAATGCCAAATGGCGCTGGCCACATTCCACACTTGAAAGCTGTGATTCTTGGTGAAGCTCTTGCATCTGAAGAAGATGATCTTGTTCTTCCCAGCAAAGAATTCTCTGATCAAGCAAATGTTCACTCACCTGAACAGTATATGGAGATGTATAAGAGGTCAATTGAGGACCCTGATGGATTCTGGTCTGAGATTGCATCACAGTTCTACTGGAAACAGAAATGGGGTGAGAAAGTCTGCGATGAAAATTTTGATGTCAGGGACGGCAAGATCAAGATTGAGTGGTTCAAGGGTGGCATTACCAACGTGTGTTATAATTGCCTGGATAGAAATATTGAAGCTGGACTTGGTGATAAAGTTGCTCTTTACTGGGAAGGCAATGAGCCCGGTTTAGATGGCAGTTTAACTTACTCTCAGCTTCTCAATCAAGTTTGCCAGGTTGCAAACTACCTGAAAGATATTGGTGTGAAGAAAGGCGATGCTGTAATTGTTTATTTGCCAATGATCAATGAGCTCCCCATCACAATGCTTGCCTGTGCTCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTGCAGAATCTCTTGCACAGAGAATCACTGACTGTAAACCAAAAGCTGTAATTACTTGCAATGCTGTTAGAAGGGGCACCAAACCTATTCTTCTGAAAGACATAGTTGATGCTGCCATCAATGATTCAGCTAAGGATGGGGTCTCCGTAGATGTATGCTTAGTTTATGATAACCCAGTGGCACTGAAGAGAGAAGATACAAAATGGACGCAAGGTCGGGATATATGGTGGCAGGATGTTATTCCTAAATATCCAAGTACTTGCCCGGTAGAGTGGGTTGATGCCGAGGATCCACTTTTTCTACTCTATACAAGTGGAAGCACTGGAAAACCTAAGGGTGTCCTCCATACCGCCGGTGGTTACATGGTATACACTGCCACAACATTCAAGTATGCATTTGACTACAAACCATCCGACATCTACTGGTGTACGGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCTTGCTCAATGGTGCAACCGTTTTAGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGCGCTGCTGGGACATTGTTGACAAATATAAAGTGTCAATATTCTACACTGCCCCCACATTGGTGCGGTCTCTCATGCGTGATGGTGAAGCATACGTTACCCGATACTCAAGGAAATCTTTACGGGTTTTGGGCAGTGTGGGTGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTCGGAGATTCAAGGTGCCCTATCTCGGATACTTGGTGGCAAACAGAAACTGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGGCCCAAAAGCCTGGTTCTGCAACTTTCCCTTTCTTTGGAATTCAGCCTGTGATAGTGGATGAGAAAGGAGTTGAAATAGATGGTGAGTGCAGTGGTTACTTGTGCATTAAGAAGTCTTGGCCTGGGGCATTCAGAACTCTATATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCTGGTTACTATTTCAGTGGTGATGGCTGCAGAAGGGATAAAGATGGATACCATTGGCTCACAGGAAGAGTGGATGATGTCATCAATGTCAGCGGACACCGTATTGGCACAGCTGAAGTGGAATCAGCTTTAGTGTCACATCCTCAATGTGCAGAGGCTGCTGTTGTCGGTGTCGAGCATGAGGTCAAAGGTCAGGGTATCTATGCATTTGTAACGCTTGTGGACAGTGTTCCTTACAGTGAAGACTTACGAAAGGACCTTATACTCACAGTTCGAAAGCAGAATAATAAAATAAACATAGCTTGCTTCAAACCAATAATCTCCGTTGGATCGACCCTTACTCACGTAAGGTATTACTTGGACGACCCAGTGCACTTGCTGGTTAGTTGTGCGGATTGCAAAAGTGTGATTGCGATTTCGTGCACCATATACGCCAAAAAGAGAAATGTAATAGATTCATCAAAACTCCTACATTACATTCGACTCAAACCATCAAGGATAAACAACAATTTTCACAAGTAA 2157 0.4386 MDSNNNMRTESYLRHVDSRKLMPNGAGHIPHLKAVILGEALASEEDDLVLPSKEFSDQANVHSPEQYMEMYKRSIEDPDGFWSEIASQFYWKQKWGEKVCDENFDVRDGKIKIEWFKGGITNVCYNCLDRNIEAGLGDKVALYWEGNEPGLDGSLTYSQLLNQVCQVANYLKDIGVKKGDAVIVYLPMINELPITMLACARIGAVHSVVFAGFSAESLAQRITDCKPKAVITCNAVRRGTKPILLKDIVDAAINDSAKDGVSVDVCLVYDNPVALKREDTKWTQGRDIWWQDVIPKYPSTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTAGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPLLNGATVLVYEGAPNYPDAGRCWDIVDKYKVSIFYTAPTLVRSLMRDGEAYVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWAQKPGSATFPFFGIQPVIVDEKGVEIDGECSGYLCIKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCRRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVDSVPYSEDLRKDLILTVRKQNNKINIACFKPIISVGSTLTHVRYYLDDPVHLLVSCADCKSVIAISCTIYAKKRNVIDSSKLLHYIRLKPSRINNNFHK* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3015 718 Gene3D - 573 651 IPR045851 -
Amo16g3015 718 PANTHER ACETYL-COENZYME A SYNTHETASE 26 640 - -
Amo16g3015 718 Gene3D - 47 570 IPR042099 -
Amo16g3015 718 CDD ACS 65 639 - -
Amo16g3015 718 PANTHER ACETYL-COENZYME A SYNTHETASE 26 640 - -
Amo16g3015 718 Pfam Acetyl-coenzyme A synthetase N-terminus 67 127 IPR032387 -
Amo16g3015 718 ProSitePatterns Putative AMP-binding domain signature. 314 325 IPR020845 -
Amo16g3015 718 SUPERFAMILY Acetyl-CoA synthetase-like 54 640 - -
Amo16g3015 718 Pfam AMP-binding enzyme 137 575 IPR000873 -
Amo16g3015 718 Pfam AMP-binding enzyme C-terminal domain 584 654 IPR025110 -
Amo16g3015 718 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 62 643 IPR011904 GO:0003987|GO:0016208|GO:0019427
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3015 Amo-Chr16 131239844 131246145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3015 13 639 Acyl Lipid Metabolism Gene Families AT5G36880 81.340 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3015 K01895 - gmx:100808939 1209.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3015 16 131239844 131246145 Amo16g3015 16 131239844 131246145 ECH
Amo16g3015 16 131239844 131246145 Amo06g2375 06 84284431 84291235 hybridization