Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2375 ATGGATTCAAATAATAATATGAGGACAGAGAGTTACCTGCGCCACGTCGATTCAAGGAAGCTAATGCCAAATGGCGCTGGCCACATTCCACACTTGAAAGCTGTGATTCTTGGTGAAGCTCTTGCATCTGAAGAAGATGATCTTGTTCTTCCCAGCAAGGAATTCTCTGATCAAGCAAATGTTCACTCACCTGAACAGTATATGGAGATGTATAAGAGGTCAATTGAGGACCCTGATGGATTCTGGTCTGAGATTGCATCACAGTTCTACTGGAAACAGAAATGGGGTGAGAAAGTCTGCGATGAAAATTTTGATGTCAGGGACGGCAAGATCAAGATTGAGTGGTTCAAGGGTGGCATTACCAACGTGTGTTATAATTGCCTGGATAGAAATATTGAAGCTGGACTTGGTGATAAAGTTGCTCTTTACTGGGAAGGCAATGAGCCCGGTTTAGATGGCAGTTTAACTTACTCTCAGCTTCTCAATCAAGTTTGCCAGGTTGCAAACTACCTGAAAGATATTGGTGTGAAGAAAGGCGATGCTGTAATTGTTTATTTGCCAATGATCAATGAGCTCCCCATCACAATGCTTGCCTGTGCTCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTGCAGAATCTCTTGCACAGAGAATCACTGACTGTAAACCAAAAGCTGTAATTACTTGCAATGCTGTTAGAAGGGGCACCAAACCTATTCTTCTGAAAGACATAGTTGATGCTGCCATCAATGATTCAGCTAAGGATGGGGTCTCCGTAGATGTATGCTTAGTTTATGATAACCCAGTGGCACTGAAGAGAGAAGATACAAAATGGACGCAAGGTCGGGATATATGGTGGCAGGATGTTATTCCTAAATATCCAAGTACTTGCCCGGTAGAGTGGGTTGATGCCGAGGATCCACTTTTTCTACTCTATACAAGTGGAAGCACTGGAAAACCTAAGGGTGTCCTCCATACCGCCGGTGGTTACATGGTATACACTGCCACAACATTCAAGTATGCATTTGACTACAAACCATCCGACATCTACTGGTGTACGGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCTTGCTCAATGGTGCAACCGTTTTAGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGCGCTGCTGGGACATTGTTGACAAATATAAAGTGTCAATATTCTACACTGCCCCCACATTGGTGCGGTCTCTCATGCGTGATGGTGAAGCATACGTTACCCGATACTCAAGGAAATCTTTACGGGTTTTGGGCAGTGTGGGTGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTCGGAGATTCAAGGTGCCCTATCTCGGATACTTGGTGGCAAACAGAAACTGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGGCCCAAAAGCCTGGTTCTGCAACTTTCCCTTTCTTTGGAATTCAGCCTGTGATAGTGGATGAGAAAGGAGTTGAAATAGATGGTGAGTGCAGTGGTTACTTGTGCATTAAGAAGTCTTGGCCTGGGGCATTCAGAACTCTATATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCTGGTTACTATTTCAGTGGTGATGGCTGCAGAAGGGATAAAGATGGATACCATTGGCTCACAGGAAGAGTGGATGATGTCATCAATGTCAGGTATTGTTAG 1737 0.4433 MDSNNNMRTESYLRHVDSRKLMPNGAGHIPHLKAVILGEALASEEDDLVLPSKEFSDQANVHSPEQYMEMYKRSIEDPDGFWSEIASQFYWKQKWGEKVCDENFDVRDGKIKIEWFKGGITNVCYNCLDRNIEAGLGDKVALYWEGNEPGLDGSLTYSQLLNQVCQVANYLKDIGVKKGDAVIVYLPMINELPITMLACARIGAVHSVVFAGFSAESLAQRITDCKPKAVITCNAVRRGTKPILLKDIVDAAINDSAKDGVSVDVCLVYDNPVALKREDTKWTQGRDIWWQDVIPKYPSTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTAGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPLLNGATVLVYEGAPNYPDAGRCWDIVDKYKVSIFYTAPTLVRSLMRDGEAYVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWAQKPGSATFPFFGIQPVIVDEKGVEIDGECSGYLCIKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCRRDKDGYHWLTGRVDDVINVRYC* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2375 578 Pfam AMP-binding enzyme 137 576 IPR000873 -
Amo06g2375 578 SUPERFAMILY Acetyl-CoA synthetase-like 54 576 - -
Amo06g2375 578 PANTHER ACETYL-COENZYME A SYNTHETASE 26 575 - -
Amo06g2375 578 PANTHER ACETYL-COENZYME A SYNTHETASE 26 575 - -
Amo06g2375 578 Gene3D - 47 570 IPR042099 -
Amo06g2375 578 Pfam Acetyl-coenzyme A synthetase N-terminus 67 127 IPR032387 -
Amo06g2375 578 ProSitePatterns Putative AMP-binding domain signature. 314 325 IPR020845 -
Amo06g2375 578 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 62 575 IPR011904 GO:0003987|GO:0016208|GO:0019427
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2375 Amo-Chr6 84284431 84291235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2375 9 575 Acyl Lipid Metabolism Gene Families AT5G36880 80.423 0.0 990
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2375 K01895 - gmx:100808939 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3015 16 131239844 131246145 Amo06g2375 06 84284431 84291235 hybridization