Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2975 ATGGCCGAGCTTTTGACCAAGACGAGCTTGGTTTCTTCATGGCATGGAGATACACAACATCATCATAATCCTAGGGTTTCTGTCGTTCCTAAGAGTTATAGCTTTGGTTATGGTTTGAAGAGATTCCCTTCTTTGAAGATGAAATCACAGGTGCTCAGATCTTCAACTCTGTCATCTGATTTTCATGGCAAAAAGCTCGTATTTCGTGTGAATAGATCATCATCGCCTAACAGGGTTAATTCGCAGCTTCGGCCTTCTATAGTGTCTCAGATGACTGGTAGAATTGGTAAGGTTCAGAAATGGTGGGAGAAAGGGATTCAACCTAACATGAGGGAAGTGATTTCCGCAGAGGACCTTGTGAATTCACTATTGAACGCAGGGGACAAGCTTGTTATTGTTGATTTCTTCAGTCCTGGTTGTGGTGGCTGCAAAGCCCTTCATCCTAAGATATGTCAATTGGCTGAGATGAATCCTGATATTCAGTTCCTTCAGGTGAACTATGAGGATCATAGATCCATGTGTTATAGCCTCAATGTCCATGTTCTTCCCTTCTTCCGCTTCTATAGAGGAGCTGAAGGTCGTTTATGCCAGTTTAGCTGTACCAATGCTACGATAAAGAAGTTTAGAGATGCATTAGCTAAACACACTCCAGAAAGATGTAGCTTGGAGCCAACAAAAGGGTTAGAAGAGAAAGAACTTCTAGCACTTGCTGCCAACAAAGAACTCAACTTCACATACACACCAAAACCAAAACCAAAACCGAAACCAGTTCAACCTGCTGCACCCAGTTTAAATCCCCTCCGTTTACCCTCATTCATAGCAAATTCTGATGTCTCCAACGACAGAACCTTGGCCACTTCTGGGAGATGA 870 0.4299 MAELLTKTSLVSSWHGDTQHHHNPRVSVVPKSYSFGYGLKRFPSLKMKSQVLRSSTLSSDFHGKKLVFRVNRSSSPNRVNSQLRPSIVSQMTGRIGKVQKWWEKGIQPNMREVISAEDLVNSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDIQFLQVNYEDHRSMCYSLNVHVLPFFRFYRGAEGRLCQFSCTNATIKKFRDALAKHTPERCSLEPTKGLEEKELLALAANKELNFTYTPKPKPKPKPVQPAAPSLNPLRLPSFIANSDVSNDRTLATSGR* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2975 289 Gene3D Glutaredoxin 99 216 - -
Amo16g2975 289 Pfam Thioredoxin 121 192 IPR013766 -
Amo16g2975 289 PANTHER THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC 1 287 - -
Amo16g2975 289 SUPERFAMILY Thioredoxin-like 99 215 IPR036249 -
Amo16g2975 289 MobiDBLite consensus disorder prediction 245 289 - -
Amo16g2975 289 MobiDBLite consensus disorder prediction 269 289 - -
Amo16g2975 289 ProSiteProfiles Thioredoxin domain profile. 77 217 IPR013766 -
Amo16g2975 289 CDD TRX_family 126 192 - -
Amo16g2975 289 PANTHER THIOREDOXIN, MITOCHONDRIAL 1 287 - -
Amo16g2975 289 MobiDBLite consensus disorder prediction 249 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2975 Amo-Chr16 129730024 129732936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2975 - - var:108327816 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2975 16 129730024 129732936 Amo16g2975 16 129730024 129732936 ECH
Amo16g2975 16 129730024 129732936 Amo06g2267 06 80494738 80497614 hybridization