Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2267 ATGGCCGAGCTTTTGACCAAGACGAGCTTGGTTTCTTCATGGCATGGAGATACACAACATCATCATAATCCTAGGGTTTCTGTCGTTCCTAAGAGTTATAGCTTCGGTTATGGTTTGAAGAGATTCCCTTCTTTGAAGATGAAATCACAGGTGCTCAGATCTTCAACTCTGTCATCTGATTTTCATGGCAAAAAGCTCCTATTTCGTGTGAATAGATCATCATCGCCTAACAGGGTTAATTCGCAGCTTCGACCTTCTATAGTGTCTCAGATGACTGGTAGAATTGGTAAGGTTCAGAAATGGTGGGAGAAAGGGATTCAACCGAACATGAGGGAAGTGACTTCCGCAGAGGACCTTGTGAATTCACTATTGAACGCAGGGGACAAGCTTGTTATTGTTGATTTCTTCAGTCCTGGTTGTGGTGGCTGCAAAGCCCTTCATCCTAAGATATGTCAATTGGCTGAGATGAATCCTGATATTCAGTTCCTTCAGGTGAACTATGAGGATCATAGATCCATGTGTTATAGCCTCAATGTCCATGTTCTTCCCTTCTTCCGCTTCTATAGAGGAGCTGAAGGTCGTTTATGCCAGTTTAGCTGTACCAATGCTACGATCAAGAAGTTTAGAGATGCATTAGCTAAACACACTCCAGAAAGATGTAGCTTGGAGCCAACAAAAGGGTTAGAAGAGAAAGAACTTCTAGCACTTGCTGCCAACAAAGAACTCAACTTCACATACACACCAAAACCAAAACCGAAACCAGTTCAACCTGCTGCACCCAGTTTAAATCCCCTCCGTTTACCCTCATTCATAGCAAAGTCTGATGTCTCCAAAGACAGAACCTTGGCCACTTCTGGGAGATGA 864 0.434 MAELLTKTSLVSSWHGDTQHHHNPRVSVVPKSYSFGYGLKRFPSLKMKSQVLRSSTLSSDFHGKKLLFRVNRSSSPNRVNSQLRPSIVSQMTGRIGKVQKWWEKGIQPNMREVTSAEDLVNSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDIQFLQVNYEDHRSMCYSLNVHVLPFFRFYRGAEGRLCQFSCTNATIKKFRDALAKHTPERCSLEPTKGLEEKELLALAANKELNFTYTPKPKPKPVQPAAPSLNPLRLPSFIAKSDVSKDRTLATSGR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2267 287 PANTHER THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC 1 285 - -
Amo06g2267 287 Pfam Thioredoxin 121 192 IPR013766 -
Amo06g2267 287 PANTHER THIOREDOXIN, MITOCHONDRIAL 1 285 - -
Amo06g2267 287 MobiDBLite consensus disorder prediction 246 266 - -
Amo06g2267 287 Gene3D Glutaredoxin 99 216 - -
Amo06g2267 287 SUPERFAMILY Thioredoxin-like 99 215 IPR036249 -
Amo06g2267 287 ProSiteProfiles Thioredoxin domain profile. 77 217 IPR013766 -
Amo06g2267 287 CDD TRX_family 126 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2267 Amo-Chr6 80494738 80497614 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2267 - - var:108327816 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2975 16 129730024 129732936 Amo06g2267 06 80494738 80497614 hybridization